Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 NP_113623 17 3301 NP_055289 17 3301 NP_001009568 17 3301 NP_001020774 17 4312 NP_000440 17 4312 XP_005245463 17 4312 XP_005245462 17 4312 NP_055572 16 5631 NP_620410 16 5631 NP_060218 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_003322 16 7355 NP_054790 16 7355 NP_001258740 16 7355 NP_004255 16 7355 XP_006723818 16 7355 XP_006723817 16 7355 XP_006723816 16 7355 XP_006723815 16 7355 XP_006723814 16 7355 XP_006723813 16 7355 XP_005260405 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_005363 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_036366 15 9605 NP_005959 15 9605 NP_689698 15 9605 NP_001107563 15 9605 NP_001247 15 9605 NP_112480 15 9605 XP_005261914 15 9605 XP_005272540 15 9605 XP_005272539 15 9605 XP_005272538 15 9605 XP_005272537 15 9605 XP_005272536 15 9605 XP_005272535 15 9605 XP_006722284 15 9605 XP_006722283 15 9605 XP_006722282 15 9605 XP_005257952 15 9605 XP_006722280 15 9605 XP_005257949 15 9605 NP_004277 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 PAGA NLQS Sbjct: 3 PAGAKNLQS 11>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 PAGA NLQS Sbjct: 69 PAGAKNLQS 77>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 PAGA NLQS Sbjct: 69 PAGAKNLQS 77>NP_113623 Length = 228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 PAG +NL+S Sbjct: 105 PAGPSNLKS 113>NP_055289 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PAGANNL 7 PAG+NN+ Sbjct: 144 PAGSNNI 150>NP_001009568 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PAGANNL 7 PAG+NN+ Sbjct: 144 PAGSNNI 150>NP_001020774 Length = 616 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNLQ Sbjct: 316 GANNLQ 321>NP_000440 Length = 616 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNLQ Sbjct: 316 GANNLQ 321>XP_005245463 Length = 616 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNLQ Sbjct: 316 GANNLQ 321>XP_005245462 Length = 616 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNLQ Sbjct: 316 GANNLQ 321>NP_055572 Length = 1016 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 P+GA+ LQS Sbjct: 167 PSGADALQS 175>NP_620410 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 P+G +N+QS Sbjct: 148 PSGPDNVQS 156>NP_060218 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PAGANNL 7 P+GAN+L Sbjct: 121 PSGANSL 127>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 3745 PLGAQELQS 3753>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 3870 PLGAQELQS 3878>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 3791 PLGAQELQS 3799>NP_003322 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAGANNLQS 9 P GAN+L + Sbjct: 785 PGGANSLST 793>NP_054790 Length = 2063 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1144 PGGPNNMPS 1152>NP_001258740 Length = 68 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAGANNLQS 9 PA NN+Q+ Sbjct: 32 PASFNNIQT 40>NP_004255 Length = 144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAGANNLQS 9 PA NN+Q+ Sbjct: 32 PASFNNIQT 40>XP_006723818 Length = 1975 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1144 PGGPNNMPS 1152>XP_006723817 Length = 2020 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1101 PGGPNNMPS 1109>XP_006723816 Length = 2034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1144 PGGPNNMPS 1152>XP_006723815 Length = 2051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1132 PGGPNNMPS 1140>XP_006723814 Length = 2052 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1133 PGGPNNMPS 1141>XP_006723813 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1144 PGGPNNMPS 1152>XP_005260405 Length = 2063 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P G NN+ S Sbjct: 1144 PGGPNNMPS 1152>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 3792 PLGAQELQS 3800>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 3792 PLGAQELQS 3800>NP_005363 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PAGANNL 7 PAG+N+L Sbjct: 128 PAGSNSL 134>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 4108 PLGAQELQS 4116>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAGANNLQS 9 P GA LQS Sbjct: 3937 PLGAQELQS 3945>NP_036366 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAGANNLQS 9 P+ AN++QS Sbjct: 122 PSEANSIQS 130>NP_005959 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 559 GANNLE 564>NP_689698 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGANNLQS 9 AGA+ LQS Sbjct: 61 AGASELQS 68>NP_001107563 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 774 PKGANN 779>NP_001247 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 768 PKGANN 773>NP_112480 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 520 GANNLE 525>XP_005261914 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAGANNLQ 8 PA ++NLQ Sbjct: 518 PAASSNLQ 525>XP_005272540 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 400 GANNLE 405>XP_005272539 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 424 GANNLE 429>XP_005272538 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 439 GANNLE 444>XP_005272537 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 505 GANNLE 510>XP_005272536 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 541 GANNLE 546>XP_005272535 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GANNLQ 8 GANNL+ Sbjct: 544 GANNLE 549>XP_006722284 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 633 PKGANN 638>XP_006722283 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 686 PKGANN 691>XP_006722282 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 707 PKGANN 712>XP_005257952 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 707 PKGANN 712>XP_006722280 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 743 PKGANN 748>XP_005257949 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 PAGANN 6 P GANN Sbjct: 767 PKGANN 772>NP_004277 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAGANNLQ 8 PA ++NLQ Sbjct: 630 PAASSNLQ 637Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.115 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 669,638 Number of extensions: 840 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |