Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_001177652 17 3301 NP_001005374 17 3301 NP_612370 17 3301 NP_001005373 17 3301 NP_001164163 17 3301 NP_776175 17 3301 NP_995586 17 3301 NP_001164164 17 3301 NP_004901 17 3301 XP_005254367 17 3301 XP_006720536 17 3301 XP_006717379 17 3301 NP_057427 16 5631 NP_001171809 16 5631 NP_001098713 16 5631 NP_065817 16 5631 NP_001273886 15 9605 NP_001243509 15 9605 NP_149115 15 9605 NP_004435 15 9605 NP_002963 15 9605 NP_001013764 15 9605 NP_037438 15 9605 NP_680086 15 9605 XP_005261992 15 9605 XP_005261991 15 9605 XP_005261989 15 9605 XP_005261988 15 9605 XP_006719734 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4311 PAFEAAQVE 4319>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4327 PAFEAAQVE 4335>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4328 PAFEAAQVE 4336>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4359 PAFEAAQVE 4367>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4383 PAFEAAQVE 4391>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4382 PAFEAAQVE 4390>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4382 PAFEAAQVE 4390>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4382 PAFEAAQVE 4390>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PAFEAAQVK 9 PAFEAAQV+ Sbjct: 4383 PAFEAAQVE 4391>NP_001177652 Length = 696 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AFEAAQVK 9 AFEA QVK Sbjct: 456 AFEALQVK 463>NP_001005374 Length = 723 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AFEAAQVK 9 AFEA QVK Sbjct: 456 AFEALQVK 463>NP_612370 Length = 723 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AFEAAQVK 9 AFEA QVK Sbjct: 456 AFEALQVK 463>NP_001005373 Length = 723 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AFEAAQVK 9 AFEA QVK Sbjct: 456 AFEALQVK 463>NP_001164163 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAFEAAQVK 9 P FE AQ+K Sbjct: 561 PKFETAQLK 569>NP_776175 Length = 1150 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAFEAAQV 8 PAF AAQ+ Sbjct: 745 PAFTAAQI 752>NP_995586 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAFEAAQVK 9 P FE AQ+K Sbjct: 425 PKFETAQLK 433>NP_001164164 Length = 824 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAFEAAQVK 9 P FE AQ+K Sbjct: 561 PKFETAQLK 569>NP_004901 Length = 1244 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAFEAAQVK 9 PA EAAQ++ Sbjct: 712 PALEAAQMR 720>XP_005254367 Length = 1031 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAFEAAQV 8 PAF AAQ+ Sbjct: 626 PAFTAAQI 633>XP_006720536 Length = 1072 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAFEAAQV 8 PAF AAQ+ Sbjct: 667 PAFTAAQI 674>XP_006717379 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AFEAAQVK 9 AFEA QVK Sbjct: 456 AFEALQVK 463>NP_057427 Length = 3114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AFEAAQVK 9 AF+A+Q+K Sbjct: 466 AFQASQIK 473>NP_001171809 Length = 1148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAFEAAQVK 9 P+F AAQ++ Sbjct: 127 PSFPAAQIE 135>NP_001098713 Length = 1101 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAFEAAQVK 9 P+F AAQ++ Sbjct: 127 PSFPAAQIE 135>NP_065817 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAFEAAQVK 9 P+F AAQ++ Sbjct: 127 PSFPAAQIE 135>NP_001273886 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFEAAQVK 9 AFE QVK Sbjct: 100 AFETLQVK 107>NP_001243509 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAFEAAQV 8 PA EAA++ Sbjct: 27 PALEAARI 34>NP_149115 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFEAAQVK 9 AFE QVK Sbjct: 243 AFETLQVK 250>NP_004435 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PAFEAAQ 7 P FEAA+ Sbjct: 257 PGFEAAE 263>NP_002963 Length = 1893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FEAAQVK 9 FEA QVK Sbjct: 1380 FEARQVK 1386>NP_001013764 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAFEAAQVK 9 P FEAA ++ Sbjct: 639 PRFEAAAIQ 647>NP_037438 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAFEAAQV 8 PAF AQV Sbjct: 77 PAFPRAQV 84>NP_680086 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAFEAAQV 8 PAF AQV Sbjct: 77 PAFPRAQV 84>XP_005261992 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FEAAQVK 9 FEA QVK Sbjct: 1354 FEARQVK 1360>XP_005261991 Length = 1868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FEAAQVK 9 FEA QVK Sbjct: 1355 FEARQVK 1361>XP_005261989 Length = 1891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FEAAQVK 9 FEA QVK Sbjct: 1378 FEARQVK 1384>XP_005261988 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FEAAQVK 9 FEA QVK Sbjct: 1381 FEARQVK 1387>XP_006719734 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFEAAQVK 9 AFE QVK Sbjct: 243 AFETLQVK 250Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.121 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,702 Number of extensions: 347 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |