Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006721912                                                           17    2528
NP_115804                                                              17    3301
XP_006724772                                                           17    3301
XP_005255351                                                           17    3301
XP_005252336                                                           17    3301
NP_001034592                                                           17    3301
NP_002542                                                              17    4312
NP_919310                                                              17    4312
NP_919311                                                              17    4312
NP_919309                                                              17    4312
NP_919313                                                              17    4312
NP_073618                                                              17    4312
NP_060482                                                              17    4312
NP_001092049                                                           17    4312
NP_036505                                                              17    4312
XP_006716784                                                           17    4312
XP_005251425                                                           17    4312
XP_005251424                                                           17    4312
XP_005251423                                                           17    4312
XP_005251422                                                           17    4312
XP_005251421                                                           17    4312
NP_001191355                                                           16    5631
NP_001093320                                                           16    5631
NP_001094101                                                           16    5631
NP_667345                                                              16    5631
NP_002495                                                              16    5631
NP_003300                                                              16    5631
NP_667344                                                              16    5631
NP_001693                                                              16    5631
NP_002305                                                              16    5631
NP_775871                                                              16    5631
XP_006721061                                                           16    5631
XP_006716839                                                           16    5631
XP_005251532                                                           16    5631
XP_005251531                                                           16    5631
XP_005251530                                                           16    5631
XP_005251072                                                           16    5631
XP_006710064                                                           16    5631
NP_001171512                                                           16    7355
NP_001171488                                                           16    7355
NP_001068567                                                           16    7355
NP_003717                                                              16    7355
NP_001156757                                                           16    7355
NP_001156758                                                           16    7355
NP_005234                                                              16    7355
NP_053733                                                              16    7355
NP_058633                                                              16    7355
NP_055030                                                              16    7355
XP_006724562                                                           16    7355
XP_005274609                                                           16    7355
XP_006724230                                                           16    7355
XP_005257813                                                           16    7355
XP_005257814                                                           16    7355
XP_005257812                                                           16    7355
XP_005258114                                                           16    7355
XP_005258113                                                           16    7355
XP_005258112                                                           16    7355
XP_005258111                                                           16    7355
XP_005254804                                                           16    7355
XP_006720791                                                           16    7355
XP_005254803                                                           16    7355
XP_005254800                                                           16    7355
XP_005254799                                                           16    7355
XP_005254051                                                           16    7355
NP_003913                                                              16    7355
NP_110402                                                              15    9605
NP_116031                                                              15    9605
NP_001073336                                                           15    9605
NP_000309                                                              15    9605
NP_689703                                                              15    9605
NP_001264084                                                           15    9605
NP_001165557                                                           15    9605
NP_001165558                                                           15    9605
NP_862827                                                              15    9605
NP_001131140                                                           15    9605
NP_001096637                                                           15    9605
NP_036247                                                              15    9605
NP_001010883                                                           15    9605
NP_001131139                                                           15    9605
XP_006719082                                                           15    9605
XP_005253849                                                           15    9605
XP_006711813                                                           15    9605
XP_005273128                                                           15    9605
XP_006711812                                                           15    9605
NP_612209                                                              15    9605
>XP_006721912
          Length = 162

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQR
Sbjct: 106 PACWTQR 112
>NP_115804
          Length = 1810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   PACGTQRTA 9
           P+CGT+ +A
Sbjct: 370 PSCGTKGSA 378
>XP_006724772
          Length = 1605

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   PACGTQRTA 9
           P+CGT+ +A
Sbjct: 165 PSCGTKGSA 173
>XP_005255351
          Length = 370

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  ACGTQRTA 9
          ACG+ RTA
Sbjct: 89 ACGSLRTA 96
>XP_005252336
          Length = 227

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PACGTQRTA 9
           PAC + RT+
Sbjct: 187 PACSSSRTS 195
>NP_001034592
          Length = 553

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ACGTQRTA 9
           ACG+ RTA
Sbjct: 295 ACGSLRTA 302
>NP_002542
          Length = 321

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  PACGTQRTA 9
          P  GT RTA
Sbjct: 9  PEAGTNRTA 17
>NP_919310
          Length = 465

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 169 PACSTQQ 175
>NP_919311
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>NP_919309
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>NP_919313
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>NP_073618
          Length = 515

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 219 PACSTQQ 225
>NP_060482
          Length = 2108

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGTQ
Sbjct: 633 PICGTQ 638
>NP_001092049
          Length = 904

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  PACGTQ 6
          PACG Q
Sbjct: 13 PACGAQ 18
>NP_036505
          Length = 321

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  PACGTQRTA 9
          P  GT RTA
Sbjct: 9  PEAGTNRTA 17
>XP_006716784
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>XP_005251425
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>XP_005251424
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>XP_005251423
          Length = 432

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 136 PACSTQQ 142
>XP_005251422
          Length = 481

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 185 PACSTQQ 191
>XP_005251421
          Length = 619

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   PACGTQR 7
           PAC TQ+
Sbjct: 323 PACSTQQ 329
>NP_001191355
          Length = 613

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   PACGTQRT 8
           P CGT+ +
Sbjct: 155 PGCGTEHS 162
>NP_001093320
          Length = 479

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   PACGTQRT 8
           P CGT  T
Sbjct: 458 PCCGTSPT 465
>NP_001094101
          Length = 481

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   PACGTQRT 8
           P CGT  T
Sbjct: 460 PCCGTSPT 467
>NP_667345
          Length = 833

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>NP_002495
          Length = 1120

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>NP_003300
          Length = 437

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   CGTQRTA 9
           CG QR+A
Sbjct: 135 CGAQRSA 141
>NP_667344
          Length = 1024

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>NP_001693
          Length = 1584

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   CGTQR 7
           CGTQR
Sbjct: 569 CGTQR 573
>NP_002305
          Length = 647

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   PACGTQRT 8
           P CGT+ +
Sbjct: 189 PGCGTEHS 196
>NP_775871
          Length = 8384

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   CGTQR 7
           CGTQR
Sbjct: 716 CGTQR 720
>XP_006721061
          Length = 688

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  PACGTQ 6
          P+CGT+
Sbjct: 35 PSCGTE 40
>XP_006716839
          Length = 833

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>XP_005251532
          Length = 834

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>XP_005251531
          Length = 1025

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>XP_005251530
          Length = 1121

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  CGTQR 7
          CGTQR
Sbjct: 32 CGTQR 36
>XP_005251072
          Length = 1586

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   CGTQR 7
           CGTQR
Sbjct: 566 CGTQR 570
>XP_006710064
          Length = 688

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  PACGTQ 6
          P+CGT+
Sbjct: 35 PSCGTE 40
>NP_001171512
          Length = 129

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  CGTQRTA 9
          CGT+R A
Sbjct: 35 CGTRRIA 41
>NP_001171488
          Length = 148

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  CGTQRTA 9
          CGT+R A
Sbjct: 54 CGTRRIA 60
>NP_001068567
          Length = 358

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   PACGTQ 6
           P+CG+Q
Sbjct: 241 PSCGSQ 246
>NP_003717
          Length = 359

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   PACGTQ 6
           P+CG+Q
Sbjct: 241 PSCGSQ 246
>NP_001156757
          Length = 655

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   PACGTQRTA 9
           P CG Q  A
Sbjct: 526 PGCGNQNFA 534
>NP_001156758
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   PACGTQRTA 9
           P CG Q  A
Sbjct: 471 PGCGNQNFA 479
>NP_005234
          Length = 656

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   PACGTQRTA 9
           P CG Q  A
Sbjct: 527 PGCGNQNFA 535
>NP_053733
          Length = 661

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   PACGTQRTA 9
           P CG Q  A
Sbjct: 532 PGCGNQNFA 540
>NP_058633
          Length = 1462

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1    PACGTQ 6
            P CGT+
Sbjct: 1284 PTCGTE 1289
>NP_055030
          Length = 1297

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   ACGTQ 6
           ACGTQ
Sbjct: 537 ACGTQ 541
>XP_006724562
          Length = 1326

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1    PACGTQ 6
            P CGT+
Sbjct: 1148 PTCGTE 1153
>XP_005274609
          Length = 1468

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1    PACGTQ 6
            P CGT+
Sbjct: 1290 PTCGTE 1295
>XP_006724230
          Length = 639

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   PACGTQRTA 9
           P CG Q  A
Sbjct: 527 PGCGNQNFA 535
>XP_005257813
          Length = 265

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   PACGTQ 6
           P+CG+Q
Sbjct: 147 PSCGSQ 152
>XP_005257814
          Length = 265

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   PACGTQ 6
           P+CG+Q
Sbjct: 147 PSCGSQ 152
>XP_005257812
          Length = 341

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   PACGTQ 6
           P+CG+Q
Sbjct: 241 PSCGSQ 246
>XP_005258114
          Length = 237

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2  ACGTQR 7
          ACG QR
Sbjct: 12 ACGAQR 17
>XP_005258113
          Length = 237

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2  ACGTQR 7
          ACG QR
Sbjct: 12 ACGAQR 17
>XP_005258112
          Length = 238

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2  ACGTQR 7
          ACG QR
Sbjct: 12 ACGAQR 17
>XP_005258111
          Length = 238

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2  ACGTQR 7
          ACG QR
Sbjct: 12 ACGAQR 17
>XP_005254804
          Length = 4796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    ACGTQ 6
            ACGTQ
Sbjct: 4180 ACGTQ 4184
>XP_006720791
          Length = 4853

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    ACGTQ 6
            ACGTQ
Sbjct: 4237 ACGTQ 4241
>XP_005254803
          Length = 4854

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    ACGTQ 6
            ACGTQ
Sbjct: 4238 ACGTQ 4242
>XP_005254800
          Length = 4861

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    ACGTQ 6
            ACGTQ
Sbjct: 4245 ACGTQ 4249
>XP_005254799
          Length = 4861

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    ACGTQ 6
            ACGTQ
Sbjct: 4245 ACGTQ 4249
>XP_005254051
          Length = 306

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  ACGTQRTA 9
          AC TQR +
Sbjct: 15 ACATQRAS 22
>NP_003913
          Length = 4861

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    ACGTQ 6
            ACGTQ
Sbjct: 4245 ACGTQ 4249
>NP_110402
          Length = 359

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   CGTQRTA 9
           CG  RTA
Sbjct: 141 CGCSRTA 147
>NP_116031
          Length = 359

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   CGTQRTA 9
           CG  RTA
Sbjct: 141 CGCSRTA 147
>NP_001073336
          Length = 305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 281 PKCGTE 286
>NP_000309
          Length = 305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 281 PKCGTE 286
>NP_689703
          Length = 500

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P+CG Q
Sbjct: 196 PSCGVQ 201
>NP_001264084
          Length = 326

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P+CG Q
Sbjct: 237 PSCGVQ 242
>NP_001165557
          Length = 305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 281 PKCGTE 286
>NP_001165558
          Length = 305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 281 PKCGTE 286
>NP_862827
          Length = 480

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 416 PTCGTR 421
>NP_001131140
          Length = 1982

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 673 PICGTE 678
>NP_001096637
          Length = 271

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   ACGTQRT 8
           +C TQRT
Sbjct: 208 SCRTQRT 214
>NP_036247
          Length = 1982

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 673 PICGTE 678
>NP_001010883
          Length = 360

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   ACGTQRTA 9
           ACG  RT+
Sbjct: 200 ACGHSRTS 207
>NP_001131139
          Length = 1982

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P CGT+
Sbjct: 673 PICGTE 678
>XP_006719082
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   CGTQRTA 9
           CG  RTA
Sbjct: 182 CGCSRTA 188
>XP_005253849
          Length = 411

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3   CGTQRTA 9
           CG  RTA
Sbjct: 193 CGCSRTA 199
>XP_006711813
          Length = 225

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P+CG Q
Sbjct: 196 PSCGVQ 201
>XP_005273128
          Length = 291

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P+CG Q
Sbjct: 196 PSCGVQ 201
>XP_006711812
          Length = 586

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   PACGTQ 6
           P+CG Q
Sbjct: 196 PSCGVQ 201
>NP_612209
          Length = 252

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 5/7 (71%)

Query: 1   PACGTQR 7
           P CGT +
Sbjct: 164 PLCGTNK 170
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.124    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 609,236
Number of extensions: 976
Number of successful extensions: 85
Number of sequences better than 10000.0: 85
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 85
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

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