Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 509 NP_009297 20 509 NP_001243778 18 1482 NP_002682 18 1482 XP_005259065 18 1482 XP_006723311 18 1482 XP_005259064 18 1482 XP_005259063 18 1482 NP_066009 18 1935 NP_478144 18 1935 NP_055969 17 2528 NP_037486 17 4312 NP_473367 17 4312 NP_004708 17 4312 XP_005273538 17 4312 XP_006716236 17 4312 XP_006716235 17 4312 NP_054878 16 5631 XP_005265151 16 5631 XP_006713183 16 5631 XP_006713182 16 5631 NP_001259031 16 7355 NP_001121371 16 7355 NP_001121370 16 7355 NP_001073922 16 7355 XP_005253228 16 7355 NP_002830 15 9605 NP_001245308 15 9605 NP_003606 15 9605 NP_001245309 15 9605 NP_001171486 15 9605 NP_001171487 15 9605 NP_899180 15 9605 NP_003825 15 9605 XP_005251759 15 9605 XP_005251758 15 9605 XP_006716891 15 9605 XP_006716890 15 9605 XP_006716889 15 9605 XP_006716888 15 9605 XP_006716887 15 9605 XP_006716886 15 9605 XP_006716885 15 9605 XP_006716884 15 9605 XP_006716883 15 9605 XP_006716882 15 9605 XP_006716881 15 9605 XP_006716880 15 9605 XP_006716879 15 9605 XP_006716878 15 9605 XP_006716877 15 9605 XP_006716876 15 9605 XP_005265658 15 9605 XP_005265657 15 9605 XP_005265656 15 9605 XP_005265655 15 9605 XP_006713484 15 9605 XP_005246753 15 9605 XP_005246752 15 9605 XP_005246751 15 9605 XP_006712706 15 9605 XP_006712705 15 9605 XP_006712704 15 9605 XP_005246750 15 9605 NP_071341 15 9605 NP_689633 15 9605>NP_005148 Length = 1130 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAAT DFSK Sbjct: 1108 PAATQDFSK 1116>NP_009297 Length = 1149 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAAT DFSK Sbjct: 1127 PAATQDFSK 1135>NP_001243778 Length = 1107 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 P ATLDFS Sbjct: 597 PIATLDFS 604>NP_002682 Length = 1107 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 P ATLDFS Sbjct: 597 PIATLDFS 604>XP_005259065 Length = 1083 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 P ATLDFS Sbjct: 597 PIATLDFS 604>XP_006723311 Length = 1109 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 P ATLDFS Sbjct: 623 PIATLDFS 630>XP_005259064 Length = 1133 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 P ATLDFS Sbjct: 623 PIATLDFS 630>XP_005259063 Length = 1133 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 P ATLDFS Sbjct: 623 PIATLDFS 630>NP_066009 Length = 120 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAA +DFS+ Sbjct: 6 PAAAMDFSQ 14>NP_478144 Length = 873 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAA +DFS+ Sbjct: 6 PAAAMDFSQ 14>NP_055969 Length = 234 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 P+A +DFSK Sbjct: 87 PSAPVDFSK 95>NP_037486 Length = 285 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAAT+D S+ Sbjct: 2 PAATVDHSQ 10>NP_473367 Length = 244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAAT+D S+ Sbjct: 2 PAATVDHSQ 10>NP_004708 Length = 1065 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 P ATLD+S+ Sbjct: 163 PRATLDWSE 171>XP_005273538 Length = 285 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 PAAT+D S+ Sbjct: 2 PAATVDHSQ 10>XP_006716236 Length = 1022 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 P ATLD+S+ Sbjct: 111 PRATLDWSE 119>XP_006716235 Length = 1057 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAATLDFSK 9 P ATLD+S+ Sbjct: 163 PRATLDWSE 171>NP_054878 Length = 2564 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P T+D+SK Sbjct: 764 PVMTVDYSK 772>XP_005265151 Length = 2058 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P T+D+SK Sbjct: 764 PVMTVDYSK 772>XP_006713183 Length = 2258 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P T+D+SK Sbjct: 764 PVMTVDYSK 772>XP_006713182 Length = 2422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P T+D+SK Sbjct: 764 PVMTVDYSK 772>NP_001259031 Length = 64 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PAATLDFS 8 PA +DFS Sbjct: 34 PATAMDFS 41>NP_001121371 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PAATLDFS 8 PA +DFS Sbjct: 34 PATAMDFS 41>NP_001121370 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PAATLDFS 8 PA +DFS Sbjct: 34 PATAMDFS 41>NP_001073922 Length = 2190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PAATLDF 7 P+A+LDF Sbjct: 1691 PSASLDF 1697>XP_005253228 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 PAAT+D + Sbjct: 461 PAATVDLGR 469>NP_002830 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>NP_001245308 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 288 STVDFSK 294>NP_003606 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 407 STVDFSK 413>NP_001245309 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 283 STVDFSK 289>NP_001171486 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 280 STVDFSK 286>NP_001171487 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 291 STVDFSK 297>NP_899180 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 PAA LD++ Sbjct: 117 PAAELDYA 124>NP_003825 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAATLDFS 8 PAA LD++ Sbjct: 96 PAAELDYA 103>XP_005251759 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAATLDFSK 9 PA+T D K Sbjct: 70 PASTFDMDK 78>XP_005251758 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAATLDFSK 9 PA+T D K Sbjct: 80 PASTFDMDK 88>XP_006716891 Length = 1882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 817 PLTTLEFSE 825>XP_006716890 Length = 1893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 845 PLTTLEFSE 853>XP_006716889 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 854 PLTTLEFSE 862>XP_006716888 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716887 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716886 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716885 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716884 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 858 PLTTLEFSE 866>XP_006716883 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 858 PLTTLEFSE 866>XP_006716882 Length = 1927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716881 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 863 PLTTLEFSE 871>XP_006716880 Length = 1929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716879 Length = 1931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716878 Length = 1931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716877 Length = 1931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_006716876 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAATLDFSK 9 P TL+FS+ Sbjct: 867 PLTTLEFSE 875>XP_005265658 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 288 STVDFSK 294>XP_005265657 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 270 STVDFSK 276>XP_005265656 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 275 STVDFSK 281>XP_005265655 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 283 STVDFSK 289>XP_006713484 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 412 STVDFSK 418>XP_005246753 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 349 STVDFSK 355>XP_005246752 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 291 STVDFSK 297>XP_005246751 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 291 STVDFSK 297>XP_006712706 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 292 STVDFSK 298>XP_006712705 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 348 STVDFSK 354>XP_006712704 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 348 STVDFSK 354>XP_005246750 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 349 STVDFSK 355>NP_071341 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATLDFSK 9 +T+DFSK Sbjct: 280 STVDFSK 286>NP_689633 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PAATLDFSK 9 PA+T D K Sbjct: 149 PASTFDMDK 157Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.125 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 503,757 Number of extensions: 975 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |