Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1482 NP_001087241 18 1482 XP_005265799 18 1482 XP_005265798 18 1482 XP_005265797 18 1482 NP_996816 17 4312 NP_653310 16 5631 NP_065894 16 5631 XP_005256076 16 5631 XP_006721289 16 5631 XP_006721288 16 5631 XP_006721287 16 5631 XP_005256073 16 5631 XP_005256072 16 5631 XP_005254476 16 5631 XP_005254474 16 5631 XP_006712015 16 5631 NP_060460 16 5631 NP_001091681 16 7355 NP_001091683 16 7355 NP_001091682 16 7355 NP_000852 16 7355 NP_005494 16 7355 NP_001123886 16 7355 NP_006071 16 7355 NP_001154 16 7355 NP_001265043 16 7355 NP_001265042 16 7355 NP_001455 16 7355 XP_006725606 16 7355 XP_005254388 16 7355 XP_006725182 16 7355 XP_006720544 16 7355 XP_006720543 16 7355 XP_005252025 16 7355 XP_005252024 16 7355 XP_006717156 16 7355 XP_005273525 16 7355 XP_006715902 16 7355 XP_006715901 16 7355 XP_005250168 16 7355 XP_005250167 16 7355 NP_001276793 15 9605 NP_001276791 15 9605 NP_001276790 15 9605 NP_001276792 15 9605 NP_058515 15 9605 XP_005263586 15 9605 XP_005263585 15 9605 XP_005263584 15 9605 XP_005263581 15 9605 XP_005263580 15 9605 XP_005263579 15 9605 XP_005263578 15 9605 NP_060689 15 9605>NP_000213 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 N VGSTASS Sbjct: 958 NSVGSTASS 966>NP_001087241 Length = 972 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 N VGSTASS Sbjct: 954 NSVGSTASS 962>XP_005265799 Length = 973 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 N VGSTASS Sbjct: 955 NSVGSTASS 963>XP_005265798 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 N VGSTASS Sbjct: 958 NSVGSTASS 966>XP_005265797 Length = 977 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 N VGSTASS Sbjct: 959 NSVGSTASS 967>NP_996816 Length = 5202 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NYVGSTAS 8 N VGSTAS Sbjct: 4913 NEVGSTAS 4920>NP_653310 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NYVGSTAS 8 ++VGSTAS Sbjct: 94 SHVGSTAS 101>NP_065894 Length = 1400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 ++ GSTASS Sbjct: 229 HHTGSTASS 237>XP_005256076 Length = 607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 523 YVGKTTSS 530>XP_006721289 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 576 YVGKTTSS 583>XP_006721288 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 715 YVGKTTSS 722>XP_006721287 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 734 YVGKTTSS 741>XP_005256073 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 795 YVGKTTSS 802>XP_005256072 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 795 YVGKTTSS 802>XP_005254476 Length = 1400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 ++ GSTASS Sbjct: 229 HHTGSTASS 237>XP_005254474 Length = 1406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYVGSTASS 9 ++ GSTASS Sbjct: 229 HHTGSTASS 237>XP_006712015 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NYVGSTAS 8 ++VGSTAS Sbjct: 94 SHVGSTAS 101>NP_060460 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YVGSTASS 9 YVG T SS Sbjct: 795 YVGKTTSS 802>NP_001091681 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYVGSTAS 8 +YV STAS Sbjct: 107 DYVASTAS 114>NP_001091683 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYVGSTAS 8 +YV STAS Sbjct: 107 DYVASTAS 114>NP_001091682 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYVGSTAS 8 +YV STAS Sbjct: 107 DYVASTAS 114>NP_000852 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYVGSTAS 8 +YV STAS Sbjct: 107 DYVASTAS 114>NP_005494 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 375 NYLGST 380>NP_001123886 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 375 NYLGST 380>NP_006071 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVGSTA 7 Y+GSTA Sbjct: 502 YIGSTA 507>NP_001154 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 464 NYLGST 469>NP_001265043 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NYVG+T Sbjct: 276 NYVGAT 281>NP_001265042 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NYVG+T Sbjct: 257 NYVGAT 262>NP_001455 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NYVG+T Sbjct: 276 NYVGAT 281>XP_006725606 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 375 NYLGST 380>XP_005254388 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 375 NYLGST 380>XP_006725182 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NYVG+T Sbjct: 276 NYVGAT 281>XP_006720544 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 375 NYLGST 380>XP_006720543 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 375 NYLGST 380>XP_005252025 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 464 NYLGST 469>XP_005252024 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 464 NYLGST 469>XP_006717156 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NY+GST Sbjct: 464 NYLGST 469>XP_005273525 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 NYVG+T Sbjct: 276 NYVGAT 281>XP_006715902 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVGSTA 7 Y+GSTA Sbjct: 502 YIGSTA 507>XP_006715901 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVGSTA 7 Y+GSTA Sbjct: 502 YIGSTA 507>XP_005250168 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVGSTA 7 Y+GSTA Sbjct: 502 YIGSTA 507>XP_005250167 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVGSTA 7 Y+GSTA Sbjct: 502 YIGSTA 507>NP_001276793 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 559 FLGATASS 566>NP_001276791 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 878 FLGATASS 885>NP_001276790 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 878 FLGATASS 885>NP_001276792 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 871 FLGATASS 878>NP_058515 Length = 1201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 870 FLGATASS 877>XP_005263586 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 703 FLGATASS 710>XP_005263585 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 761 FLGATASS 768>XP_005263584 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 762 FLGATASS 769>XP_005263581 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 878 FLGATASS 885>XP_005263580 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 871 FLGATASS 878>XP_005263579 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 877 FLGATASS 884>XP_005263578 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YVGSTASS 9 ++G+TASS Sbjct: 878 FLGATASS 885>NP_060689 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYVGST 6 N+VGST Sbjct: 485 NFVGST 490Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.103 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,396 Number of extensions: 531 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |