Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_112180 18 1482 XP_005245569 18 1482 XP_005245568 18 1482 XP_005245567 18 1482 XP_005245566 18 1482 NP_000520 17 3301 NP_005126 17 4312 NP_598408 17 4312 NP_001035959 17 4312 NP_001035962 17 4312 NP_001035960 17 4312 NP_001035961 17 4312 NP_056045 17 4312 NP_065759 17 4312 NP_001128243 17 4312 NP_001139433 17 4312 NP_005063 17 4312 NP_001139436 17 4312 NP_001139435 17 4312 NP_001139434 17 4312 NP_055698 17 4312 NP_006589 17 4312 XP_006725069 17 4312 XP_006720856 17 4312 XP_005248288 17 4312 XP_005262742 17 4312 XP_005262741 17 4312 XP_006714120 17 4312 XP_005262740 17 4312 XP_005262739 17 4312 XP_005262738 17 4312 XP_005262700 17 4312 XP_005262697 17 4312 XP_006714054 17 4312 XP_005262695 17 4312 XP_005276150 17 4312 NP_001186020 16 5631 NP_001186014 16 5631 NP_775804 16 5631 NP_001186018 16 5631 NP_569733 16 5631 NP_904324 16 5631 XP_006719745 16 5631 XP_006719744 16 5631 XP_005254044 16 5631 XP_005244992 16 5631 XP_006711258 16 5631 XP_005244991 16 5631 NP_443099 16 7355 NP_001231888 16 7355 NP_777598 16 7355 NP_001231889 16 7355 NP_036477 16 7355 NP_775922 16 7355 XP_005254432 16 7355 XP_006720008 16 7355 XP_006720007 16 7355 XP_006720006 16 7355 XP_005251939 16 7355 NP_004611 15 9605 NP_665802 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NYMSLFEVL 9 NY+SLFEVL Sbjct: 289 NYVSLFEVL 297>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NYMSLFEVL 9 NY+SLFEVL Sbjct: 289 NYVSLFEVL 297>NP_112180 Length = 528 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYMSLFEVL 9 NY +LFEV+ Sbjct: 316 NYFALFEVI 324>XP_005245569 Length = 355 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYMSLFEVL 9 NY +LFEV+ Sbjct: 130 NYFALFEVI 138>XP_005245568 Length = 342 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYMSLFEVL 9 NY +LFEV+ Sbjct: 130 NYFALFEVI 138>XP_005245567 Length = 438 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYMSLFEVL 9 NY +LFEV+ Sbjct: 213 NYFALFEVI 221>XP_005245566 Length = 541 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NYMSLFEVL 9 NY +LFEV+ Sbjct: 316 NYFALFEVI 324>NP_000520 Length = 297 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YMSLFEV 8 YMSLF+V Sbjct: 254 YMSLFQV 260>NP_005126 Length = 1099 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1069 NYMEFLEVL 1077>NP_598408 Length = 1150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1120 NYMEFLEVL 1128>NP_001035959 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1061 NYMEFLEVL 1069>NP_001035962 Length = 1135 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1105 NYMEFLEVL 1113>NP_001035960 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1061 NYMEFLEVL 1069>NP_001035961 Length = 1141 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1111 NYMEFLEVL 1119>NP_056045 Length = 1704 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+ +FEV Sbjct: 1292 NYVEIFEV 1299>NP_065759 Length = 1116 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1086 NYMEFLEVL 1094>NP_001128243 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1109 NYMEFLEVL 1117>NP_001139433 Length = 1079 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1049 NYMEFLEVL 1057>NP_005063 Length = 1085 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1055 NYMEFLEVL 1063>NP_001139436 Length = 1054 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1024 NYMEFLEVL 1032>NP_001139435 Length = 1079 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1049 NYMEFLEVL 1057>NP_001139434 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1057 NYMEFLEVL 1065>NP_055698 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 226 NYNTLFEV 233>NP_006589 Length = 1083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1053 NYMEFLEVL 1061>XP_006725069 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1058 NYMEFLEVL 1066>XP_006720856 Length = 1101 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1071 NYMEFLEVL 1079>XP_005248288 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 1058 NYMEFLEVL 1066>XP_005262742 Length = 584 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 226 NYNTLFEV 233>XP_005262741 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 17 NYNTLFEV 24>XP_006714120 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 37 NYNTLFEV 44>XP_005262740 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 226 NYNTLFEV 233>XP_005262739 Length = 1003 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 206 NYNTLFEV 213>XP_005262738 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY +LFEV Sbjct: 226 NYNTLFEV 233>XP_005262700 Length = 907 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+ +FEV Sbjct: 495 NYVEIFEV 502>XP_005262697 Length = 1681 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+ +FEV Sbjct: 1292 NYVEIFEV 1299>XP_006714054 Length = 1693 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+ +FEV Sbjct: 1281 NYVEIFEV 1288>XP_005262695 Length = 1704 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+ +FEV Sbjct: 1292 NYVEIFEV 1299>XP_005276150 Length = 156 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NYMSLFEVL 9 NY++L EV+ Sbjct: 148 NYLALLEVM 156>NP_001186020 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>NP_001186014 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>NP_775804 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>NP_001186018 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>NP_569733 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NYMSLFE 7 NY+ LFE Sbjct: 770 NYLQLFE 776>NP_904324 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NYMSLFE 7 NY+ LFE Sbjct: 770 NYLQLFE 776>XP_006719745 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NYMSLFE 7 NY+ LFE Sbjct: 770 NYLQLFE 776>XP_006719744 Length = 1044 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NYMSLFE 7 NY+ LFE Sbjct: 770 NYLQLFE 776>XP_005254044 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NYMSLFE 7 NY+ LFE Sbjct: 770 NYLQLFE 776>XP_005244992 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>XP_006711258 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>XP_005244991 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 ++S+FEVL Sbjct: 172 FLSMFEVL 179>NP_443099 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 +MS+F++L Sbjct: 544 FMSMFQIL 551>NP_001231888 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+S FE+ Sbjct: 171 NYISEFEI 178>NP_777598 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+S FE+ Sbjct: 171 NYISEFEI 178>NP_001231889 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+S FE+ Sbjct: 127 NYISEFEI 134>NP_036477 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NYMSLFE 7 NY +LFE Sbjct: 440 NYQTLFE 446>NP_775922 Length = 6996 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YMSLFEV 8 Y+SLF+V Sbjct: 1321 YLSLFDV 1327>XP_005254432 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NYMSLFEVL 9 NYM EVL Sbjct: 12 NYMGCVEVL 20>XP_006720008 Length = 1645 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 +MS+F++L Sbjct: 544 FMSMFQIL 551>XP_006720007 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 +MS+F++L Sbjct: 515 FMSMFQIL 522>XP_006720006 Length = 1713 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YMSLFEVL 9 +MS+F++L Sbjct: 544 FMSMFQIL 551>XP_005251939 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NYMSLFEV 8 NY+S FE+ Sbjct: 75 NYISEFEI 82>NP_004611 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYMSLF 6 NY+SLF Sbjct: 405 NYISLF 410>NP_665802 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NYMSLF 6 NY+SLF Sbjct: 405 NYISLF 410Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.143 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,262 Number of extensions: 581 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |