Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005256795 17 4312 NP_002887 16 5631 NP_001070143 16 5631 NP_660340 16 5631 NP_113680 16 5631 NP_001185774 16 5631 NP_001157819 16 7355 NP_001157814 16 7355 NP_001157816 16 7355 NP_056457 16 7355 NP_001157817 16 7355 NP_001157815 16 7355 NP_001157818 16 7355 NP_001171313 16 7355 NP_003130 16 7355 NP_005550 16 7355 XP_005259613 16 7355 XP_005262993 16 7355 XP_005262994 16 7355 XP_005247400 16 7355 XP_005247399 16 7355 XP_006713644 16 7355 XP_006713643 16 7355 XP_006713642 16 7355 XP_005247398 16 7355 XP_005247397 16 7355 XP_005247396 16 7355 XP_006713641 16 7355 XP_006713640 16 7355 NP_001033793 16 7355 NP_938022 16 7355 NP_060103 15 9605 NP_001364 15 9605 NP_848605 15 9605 NP_001129120 15 9605 NP_006834 15 9605 NP_002835 15 9605 NP_060350 15 9605 NP_001032238 15 9605 NP_006812 15 9605 XP_006725089 15 9605 XP_006725088 15 9605 XP_006725087 15 9605 XP_006725086 15 9605 XP_006725085 15 9605 XP_006725084 15 9605 XP_006725083 15 9605 XP_006725082 15 9605 XP_006718873 15 9605 XP_006718872 15 9605 XP_006715604 15 9605 XP_006715603 15 9605 XP_005267143 15 9605 XP_006715602 15 9605 XP_006715601 15 9605 XP_005267142 15 9605 XP_006715600 15 9605 XP_005267139 15 9605 XP_006715599 15 9605 XP_006715598 15 9605 XP_005264448 15 9605 XP_005264447 15 9605 XP_005264446 15 9605 XP_006711798 15 9605 NP_443175 15 9605 NP_002535 15 9605>XP_005256795 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTPLTM 8 RTPLTM Sbjct: 245 RTPLTM 250>NP_002887 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VRTPLTM 8 VRTP TM Sbjct: 197 VRTPYTM 203>NP_001070143 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTPLTMK 9 R PLTMK Sbjct: 60 RKPLTMK 66>NP_660340 Length = 92 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTPLTMK 9 R PLTMK Sbjct: 60 RKPLTMK 66>NP_113680 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VRTPLTM 8 VRTP TM Sbjct: 197 VRTPYTM 203>NP_001185774 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VRTPLTM 8 VRTP TM Sbjct: 172 VRTPYTM 178>NP_001157819 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>NP_001157814 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 486 NLRMPLTL 493>NP_001157816 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>NP_056457 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>NP_001157817 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>NP_001157815 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>NP_001157818 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>NP_001171313 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VRTPLTMK 9 +R P TMK Sbjct: 102 IRAPTTMK 109>NP_003130 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VRTPLTMK 9 +R P TMK Sbjct: 130 IRAPTTMK 137>NP_005550 Length = 3075 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRTPLTM 8 VRTP+T+ Sbjct: 1166 VRTPVTL 1172>XP_005259613 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRTPLT 7 +VRTP+T Sbjct: 17 HVRTPMT 23>XP_005262993 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRTPLTM 8 + TPLTM Sbjct: 122 IHTPLTM 128>XP_005262994 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRTPLTM 8 + TPLTM Sbjct: 122 IHTPLTM 128>XP_005247400 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>XP_005247399 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>XP_006713644 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>XP_006713643 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 413 NLRMPLTL 420>XP_006713642 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 430 NLRMPLTL 437>XP_005247398 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 486 NLRMPLTL 493>XP_005247397 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 486 NLRMPLTL 493>XP_005247396 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 486 NLRMPLTL 493>XP_006713641 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 486 NLRMPLTL 493>XP_006713640 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRTPLTM 8 N+R PLT+ Sbjct: 486 NLRMPLTL 493>NP_001033793 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRTPL 6 NVRTP+ Sbjct: 320 NVRTPI 325>NP_938022 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRTPLTM 8 + TPLTM Sbjct: 122 IHTPLTM 128>NP_060103 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPLTMK 9 TPLT+K Sbjct: 179 TPLTLK 184>NP_001364 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NVRTPLTM 8 N RTPL + Sbjct: 3821 NARTPLIL 3828>NP_848605 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRTPL 6 N+RTPL Sbjct: 526 NLRTPL 531>NP_001129120 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>NP_006834 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRTPL 6 N+RTPL Sbjct: 290 NLRTPL 295>NP_002835 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>NP_060350 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPLTMK 9 TPLT+K Sbjct: 147 TPLTLK 152>NP_001032238 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRTPLTMK 9 +VRTPL ++ Sbjct: 97 DVRTPLAVE 105>NP_006812 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRTPLTMK 9 +VRTPL ++ Sbjct: 159 DVRTPLAVE 167>XP_006725089 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006725088 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006725087 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006725086 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 1 MRTPKTLK 8>XP_006725085 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 319 MRTPKTLK 326>XP_006725084 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 319 MRTPKTLK 326>XP_006725083 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006725082 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006718873 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRTPL 6 N+RTPL Sbjct: 357 NLRTPL 362>XP_006718872 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRTPL 6 N+RTPL Sbjct: 478 NLRTPL 483>XP_006715604 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006715603 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_005267143 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006715602 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006715601 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 1 MRTPKTLK 8>XP_005267142 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006715600 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_005267139 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006715599 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_006715598 Length = 1470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTPLTMK 9 +RTP T+K Sbjct: 390 MRTPKTLK 397>XP_005264448 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPLTMK 9 TPLT+K Sbjct: 147 TPLTLK 152>XP_005264447 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPLTMK 9 TPLT+K Sbjct: 147 TPLTLK 152>XP_005264446 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPLTMK 9 TPLT+K Sbjct: 147 TPLTLK 152>XP_006711798 Length = 4586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NVRTPLTM 8 N RTPL + Sbjct: 3883 NARTPLIL 3890>NP_443175 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPLTMK 9 TPLT+K Sbjct: 165 TPLTLK 170>NP_002535 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRTPL 6 NV+TPL Sbjct: 410 NVKTPL 415Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.127 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 636,862 Number of extensions: 868 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |