Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 21 175 XP_005271924 21 175 XP_005271923 21 175 NP_065861 18 1482 XP_005267973 18 1482 NP_112211 17 2528 XP_005267209 17 2528 NP_000072 16 5631 XP_006711794 16 5631 XP_005273086 16 5631 XP_005273085 16 5631 XP_005273084 16 5631 NP_525023 16 7355 XP_006721856 16 7355 XP_006721855 16 7355 XP_006721854 16 7355 XP_006721853 16 7355 XP_005248127 16 7355 XP_005248126 16 7355 XP_005248125 16 7355 XP_005248124 16 7355 XP_005248123 16 7355 XP_005248122 16 7355 XP_005248121 16 7355 XP_005248120 16 7355 XP_006714059 16 7355 XP_005248119 16 7355 XP_005248118 16 7355 XP_005248117 16 7355 XP_005248116 16 7355 XP_005248115 16 7355 XP_005248114 16 7355 NP_619634 16 7355 NP_002462 15 9605 NP_031399 15 9605 NP_115495 15 9605 NP_000248 15 9605 NP_055928 15 9605 NP_065816 15 9605 NP_001255968 15 9605 NP_001191676 15 9605 NP_002904 15 9605 NP_001264198 15 9605 NP_036553 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_005267753 15 9605 XP_006720215 15 9605 XP_006720214 15 9605 XP_005267751 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605 NP_001005514 15 9605 NP_001004759 15 9605>NP_001261 Length = 1710 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NVRGMRKLD 9 NVRGM+KLD Sbjct: 342 NVRGMKKLD 350>XP_005271924 Length = 1710 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NVRGMRKLD 9 NVRGM+KLD Sbjct: 342 NVRGMKKLD 350>XP_005271923 Length = 1798 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NVRGMRKLD 9 NVRGM+KLD Sbjct: 342 NVRGMKKLD 350>NP_065861 Length = 509 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 +VRGM KLD Sbjct: 78 DVRGMTKLD 86>XP_005267973 Length = 537 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 +VRGM KLD Sbjct: 106 DVRGMTKLD 114>NP_112211 Length = 165 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRGMRKL 8 +RGMRKL Sbjct: 151 IRGMRKL 157>XP_005267209 Length = 108 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRGMRKL 8 +RGMRKL Sbjct: 94 IRGMRKL 100>NP_000072 Length = 3801 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 ++RGM K+D Sbjct: 2908 HIRGMYKVD 2916>XP_006711794 Length = 3022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 ++RGM K+D Sbjct: 2129 HIRGMYKVD 2137>XP_005273086 Length = 3264 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 ++RGM K+D Sbjct: 2908 HIRGMYKVD 2916>XP_005273085 Length = 3755 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 ++RGM K+D Sbjct: 2862 HIRGMYKVD 2870>XP_005273084 Length = 3801 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 ++RGM K+D Sbjct: 2908 HIRGMYKVD 2916>NP_525023 Length = 1617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 V+G+RK D Sbjct: 1381 VKGLRKAD 1388>XP_006721856 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 V+G+RK D Sbjct: 1064 VKGLRKAD 1071>XP_006721855 Length = 1551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 V+G+RK D Sbjct: 1315 VKGLRKAD 1322>XP_006721854 Length = 1577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 V+G+RK D Sbjct: 1341 VKGLRKAD 1348>XP_006721853 Length = 1617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 V+G+RK D Sbjct: 1381 VKGLRKAD 1388>XP_005248127 Length = 1322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248126 Length = 1359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 528 LKGQRKLD 535>XP_005248125 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 608 LKGQRKLD 615>XP_005248124 Length = 1467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 640 LKGQRKLD 647>XP_005248123 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 640 LKGQRKLD 647>XP_005248122 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 640 LKGQRKLD 647>XP_005248121 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 712 LKGQRKLD 719>XP_005248120 Length = 1549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 718 LKGQRKLD 725>XP_006714059 Length = 1600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248119 Length = 1601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248118 Length = 1602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248117 Length = 1626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248116 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248115 Length = 1629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>XP_005248114 Length = 1630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 ++G RKLD Sbjct: 799 LKGQRKLD 806>NP_619634 Length = 147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRGMRKL 8 +RGM+KL Sbjct: 135 IRGMQKL 141>NP_002462 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 1838 SVKGMRK 1844>NP_031399 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 N+R +R+LD Sbjct: 446 NLRKLRELD 454>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRGMRKLD 9 +RG++K D Sbjct: 5099 IRGLQKFD 5106>NP_000248 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 1836 SVKGMRK 1842>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GMRKLD 9 G+RKLD Sbjct: 1075 GLRKLD 1080>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3236 HVRGIKKL 3243>NP_001255968 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRGMRKLD 9 N+R +R+LD Sbjct: 400 NLRKLRELD 408>NP_001191676 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRGMRKL 8 NV+G RK+ Sbjct: 510 NVQGKRKI 517>NP_002904 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NVRGMRKL 8 NV+G RK+ Sbjct: 510 NVQGKRKI 517>NP_001264198 Length = 2925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRGMR 6 NV+GMR Sbjct: 48 NVKGMR 53>NP_036553 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NVRGMRK 7 N RGM+K Sbjct: 967 NARGMQK 973>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GMRKLD 9 G+RKLD Sbjct: 1076 GLRKLD 1081>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GMRKLD 9 G+RKLD Sbjct: 1076 GLRKLD 1081>XP_005267753 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 1836 SVKGMRK 1842>XP_006720215 Length = 1968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 1867 SVKGMRK 1873>XP_006720214 Length = 1978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 1877 SVKGMRK 1883>XP_005267751 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 1878 SVKGMRK 1884>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3230 HVRGIKKL 3237>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3241 HVRGIKKL 3248>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3247 HVRGIKKL 3254>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3248 HVRGIKKL 3255>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3265 HVRGIKKL 3272>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3274 HVRGIKKL 3281>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3275 HVRGIKKL 3282>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3275 HVRGIKKL 3282>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRGMRKL 8 +VRG++KL Sbjct: 3276 HVRGIKKL 3283>NP_001005514 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRGMRK 7 +V+GMRK Sbjct: 230 SVKGMRK 236>NP_001004759 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVRGMR 6 NVRG+R Sbjct: 345 NVRGLR 350Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.143 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,142 Number of extensions: 632 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |