Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 17 2528 XP_006722198 17 2528 XP_005257783 17 2528 XP_005257782 17 2528 XP_006722197 17 2528 XP_006722196 17 2528 NP_115509 17 2528 NP_002086 17 4312 NP_001129631 17 4312 NP_001129630 17 4312 NP_001129629 17 4312 NP_689929 17 4312 NP_060072 17 4312 XP_005278099 17 4312 XP_005272679 17 4312 XP_006724600 17 4312 XP_005278096 17 4312 XP_005273892 17 4312 XP_005273891 17 4312 XP_005273890 17 4312 NP_848563 16 5631 NP_001265455 16 7355 NP_004200 16 7355 NP_001265454 16 7355 NP_001265453 16 7355 NP_835739 16 7355 NP_055618 16 7355 NP_001157877 16 7355 XP_005271345 16 7355 NP_116241 16 7355 NP_775831 15 9605 NP_001123453 15 9605 NP_001278148 15 9605 NP_001171899 15 9605 NP_037436 15 9605 NP_001165102 15 9605 NP_056346 15 9605 NP_689775 15 9605 NP_009160 15 9605 NP_443178 15 9605 NP_001273506 15 9605 NP_001171900 15 9605 NP_001165103 15 9605 NP_065825 15 9605 NP_001034813 15 9605 XP_005261376 15 9605 XP_006724183 15 9605 XP_006724182 15 9605 XP_006724181 15 9605 XP_006724180 15 9605 XP_005255972 15 9605 XP_006721248 15 9605 XP_005255971 15 9605 XP_005273954 15 9605 XP_006718558 15 9605 XP_005273953 15 9605 XP_005273952 15 9605 XP_005273950 15 9605 XP_005273475 15 9605 XP_006716359 15 9605 XP_006716358 15 9605 XP_006716357 15 9605 XP_005246327 15 9605 XP_006712296 15 9605 NP_997260 15 9605 NP_057607 15 9605 NP_690862 15 9605>NP_002430 Length = 1137 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NVRDKK+ Sbjct: 377 NVRDKKK 383>XP_006722198 Length = 996 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 NV++KKRA Sbjct: 66 NVKEKKRA 73>XP_005257783 Length = 999 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 NV++KKRA Sbjct: 66 NVKEKKRA 73>XP_005257782 Length = 1000 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 NV++KKRA Sbjct: 66 NVKEKKRA 73>XP_006722197 Length = 1010 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 NV++KKRA Sbjct: 66 NVKEKKRA 73>XP_006722196 Length = 1011 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 NV++KKRA Sbjct: 66 NVKEKKRA 73>NP_115509 Length = 984 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 NV++KKRA Sbjct: 66 NVKEKKRA 73>NP_002086 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NVRDKK 6 NVRDKK Sbjct: 144 NVRDKK 149>NP_001129631 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 160 LEDKKRAT 167>NP_001129630 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 377 LEDKKRAT 384>NP_001129629 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 377 LEDKKRAT 384>NP_689929 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 VRDK+R T Sbjct: 515 VRDKRRKT 522>NP_060072 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 382 LEDKKRAT 389>XP_005278099 Length = 355 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 165 LEDKKRAT 172>XP_005272679 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 377 LEDKKRAT 384>XP_006724600 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 382 LEDKKRAT 389>XP_005278096 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 + DKKRAT Sbjct: 382 LEDKKRAT 389>XP_005273892 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 VRDK+R T Sbjct: 296 VRDKRRKT 303>XP_005273891 Length = 740 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 VRDK+R T Sbjct: 485 VRDKRRKT 492>XP_005273890 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 VRDK+R T Sbjct: 515 VRDKRRKT 522>NP_848563 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 VRD+KR T Sbjct: 714 VRDEKRLT 721>NP_001265455 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 V+DK RAT Sbjct: 371 VKDKLRAT 378>NP_004200 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVRDKKRA 8 +VRD++RA Sbjct: 97 SVRDRRRA 104>NP_001265454 Length = 1483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 V+DK RAT Sbjct: 901 VKDKLRAT 908>NP_001265453 Length = 1483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 V+DK RAT Sbjct: 901 VKDKLRAT 908>NP_835739 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVRDKKRAT 9 NV+D KRA+ Sbjct: 390 NVQDFKRAS 398>NP_055618 Length = 1483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 V+DK RAT Sbjct: 901 VKDKLRAT 908>NP_001157877 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NVR++KR Sbjct: 71 NVRERKR 77>XP_005271345 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVRDKKRAT 9 NV+D KRA+ Sbjct: 390 NVQDFKRAS 398>NP_116241 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVRDKKRAT 9 NV+D KRA+ Sbjct: 390 NVQDFKRAS 398>NP_775831 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRDKKRAT 9 V+DKK+ T Sbjct: 114 VKDKKKQT 121>NP_001123453 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 NVRDK+ T Sbjct: 241 NVRDKEGDT 249>NP_001278148 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 NVRDK+ T Sbjct: 327 NVRDKEGDT 335>NP_001171899 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>NP_037436 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NVRDKKRA 8 NVRDK A Sbjct: 109 NVRDKSYA 116>NP_001165102 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NV++KKR Sbjct: 106 NVQEKKR 112>NP_056346 Length = 1963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 1120 NVRDQKVA 1127>NP_689775 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 N+R +KR T Sbjct: 386 NMRKRKRVT 394>NP_009160 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>NP_443178 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NV++KKR Sbjct: 28 NVQEKKR 34>NP_001273506 Length = 2353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 1120 NVRDQKVA 1127>NP_001171900 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>NP_001165103 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NV++KKR Sbjct: 78 NVQEKKR 84>NP_065825 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 N R+K+R T Sbjct: 524 NARNKRRQT 532>NP_001034813 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NV++KKR Sbjct: 106 NVQEKKR 112>XP_005261376 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>XP_006724183 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 274 REKKKAT 280>XP_006724182 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>XP_006724181 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>XP_006724180 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDKKRAT 9 R+KK+AT Sbjct: 315 REKKKAT 321>XP_005255972 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NVRDKKRA 8 NVRDK A Sbjct: 109 NVRDKSYA 116>XP_006721248 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NVRDKKRA 8 NVRDK A Sbjct: 109 NVRDKSYA 116>XP_005255971 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NVRDKKRA 8 NVRDK A Sbjct: 109 NVRDKSYA 116>XP_005273954 Length = 1676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 1120 NVRDQKVA 1127>XP_006718558 Length = 1841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 607 NVRDQKVA 614>XP_005273953 Length = 2171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 937 NVRDQKVA 944>XP_005273952 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 1011 NVRDQKVA 1018>XP_005273950 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVRDKKRA 8 NVRD+K A Sbjct: 1120 NVRDQKVA 1127>XP_005273475 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 N+R +KR T Sbjct: 386 NMRKRKRVT 394>XP_006716359 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 N+R +KR T Sbjct: 391 NMRKRKRVT 399>XP_006716358 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 N+R +KR T Sbjct: 391 NMRKRKRVT 399>XP_006716357 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVRDKKRAT 9 N+R +KR T Sbjct: 391 NMRKRKRVT 399>XP_005246327 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NV++KKR Sbjct: 106 NVQEKKR 112>XP_006712296 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 NV++KKR Sbjct: 106 NVQEKKR 112>NP_997260 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRDKKRA 8 +RDK+RA Sbjct: 43 LRDKRRA 49>NP_057607 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVRDKKRAT 9 NV+ KKR++ Sbjct: 11 NVQSKKRSS 19>NP_690862 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVRDKKR 7 N+R++KR Sbjct: 107 NIRERKR 113Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.121 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 514,087 Number of extensions: 714 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |