Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 665 NP_444254 19 665 NP_444253 19 665 NP_444255 19 665 XP_005247551 19 665 XP_005247550 19 665 XP_006713712 19 665 XP_005247549 19 665 NP_003465 18 1482 NP_001275902 18 1482 NP_001275903 18 1482 NP_067673 18 1482 NP_001275904 18 1482 NP_006593 17 4312 XP_005260243 17 4312 XP_005260242 17 4312 XP_005260241 17 4312 NP_004225 16 5631 NP_001020279 16 5631 NP_002276 16 5631 XP_005259469 16 5631 XP_005264000 16 5631 XP_006712586 16 5631 XP_005263999 16 5631 NP_758860 16 7355 NP_705838 16 7355 NP_872577 15 9605 NP_201591 15 9605 NP_001480 15 9605 NP_001265475 15 9605 NP_000186 15 9605 NP_113637 15 9605 XP_005269816 15 9605 XP_006717881 15 9605 XP_005269813 15 9605 XP_005269814 15 9605 XP_005269812 15 9605 XP_005251975 15 9605 XP_005251974 15 9605 XP_005249932 15 9605 XP_005249931 15 9605 XP_005249930 15 9605 XP_005249929 15 9605 XP_005249928 15 9605 XP_005249927 15 9605 XP_005249926 15 9605 XP_005249925 15 9605 XP_006715850 15 9605 XP_005249924 15 9605 XP_005249923 15 9605 NP_149056 15 9605 NP_777589 15 9605>NP_444256 Length = 1794 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 198 NVPLQPSAR 206>NP_444254 Length = 1845 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 198 NVPLQPSAR 206>NP_444253 Length = 1914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 198 NVPLQPSAR 206>NP_444255 Length = 1863 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 198 NVPLQPSAR 206>XP_005247551 Length = 1855 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 208 NVPLQPSAR 216>XP_005247550 Length = 1856 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 208 NVPLQPSAR 216>XP_006713712 Length = 1923 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 208 NVPLQPSAR 216>XP_005247549 Length = 1924 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVPLQQSAR 9 NVPLQ SAR Sbjct: 208 NVPLQPSAR 216>NP_003465 Length = 909 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVPLQQSAR 9 N+PLQQ R Sbjct: 604 NIPLQQGGR 612>NP_001275902 Length = 906 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVPLQQSAR 9 N+PLQQ R Sbjct: 601 NIPLQQGGR 609>NP_001275903 Length = 737 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVPLQQSAR 9 N+PLQQ R Sbjct: 601 NIPLQQGGR 609>NP_067673 Length = 738 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVPLQQSAR 9 N+PLQQ R Sbjct: 604 NIPLQQGGR 612>NP_001275904 Length = 735 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NVPLQQSAR 9 N+PLQQ R Sbjct: 601 NIPLQQGGR 609>NP_006593 Length = 500 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPLQQ Sbjct: 229 NVPLQQ 234>XP_005260243 Length = 461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPLQQ Sbjct: 229 NVPLQQ 234>XP_005260242 Length = 499 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPLQQ Sbjct: 229 NVPLQQ 234>XP_005260241 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPLQQ Sbjct: 229 NVPLQQ 234>NP_004225 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 +P+QQS R Sbjct: 306 IPVQQSVR 313>NP_001020279 Length = 1251 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 VP+QQS R Sbjct: 161 VPVQQSKR 168>NP_002276 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 VP+QQS R Sbjct: 136 VPVQQSKR 143>XP_005259469 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 +P+QQS R Sbjct: 302 IPVQQSVR 309>XP_005264000 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 VP+QQS R Sbjct: 136 VPVQQSKR 143>XP_006712586 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 VP+QQS R Sbjct: 188 VPVQQSKR 195>XP_005263999 Length = 1278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPLQQSAR 9 VP+QQS R Sbjct: 188 VPVQQSKR 195>NP_758860 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NVPLQQS 7 N PLQQS Sbjct: 339 NQPLQQS 345>NP_705838 Length = 4069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+PL+QS Sbjct: 1860 NLPLEQS 1866>NP_872577 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 267 NIPVQQA 273>NP_201591 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPL+Q Sbjct: 456 NVPLEQ 461>NP_001480 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPL+Q Sbjct: 451 NVPLEQ 456>NP_001265475 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPL+Q Sbjct: 452 NVPLEQ 457>NP_000186 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 267 NIPVQQA 273>NP_113637 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005269816 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 144 NIPVQQA 150>XP_006717881 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 180 NIPVQQA 186>XP_005269813 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 267 NIPVQQA 273>XP_005269814 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 267 NIPVQQA 273>XP_005269812 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NVPLQQS 7 N+P+QQ+ Sbjct: 267 NIPVQQA 273>XP_005251975 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPL+Q Sbjct: 414 NVPLEQ 419>XP_005251974 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NVPLQQ 6 NVPL+Q Sbjct: 455 NVPLEQ 460>XP_005249932 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249931 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249930 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249929 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249928 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249927 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249926 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249925 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_006715850 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249924 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>XP_005249923 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32>NP_149056 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VPLQQSAR 9 VPLQQ R Sbjct: 231 VPLQQGFR 238>NP_777589 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NVPLQQSA 8 +VP QQSA Sbjct: 25 SVPWQQSA 32Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.119 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 606,575 Number of extensions: 659 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |