Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 299 XP_006717989 20 299 NP_001153844 17 4312 NP_113654 17 4312 NP_002604 17 4312 NP_001248745 17 4312 NP_060341 17 4312 NP_001243391 17 4312 NP_001243389 17 4312 NP_001243392 17 4312 NP_001243385 17 4312 XP_005255413 17 4312 XP_006716727 17 4312 XP_005251134 17 4312 XP_005244820 17 4312 XP_006710778 17 4312 XP_005275825 17 4312 XP_003960932 17 4312 XP_006710060 17 4312 NP_060719 16 5631 NP_001258968 16 5631 NP_001011649 16 5631 NP_705932 16 5631 NP_705934 16 5631 NP_705933 16 5631 XP_005267399 16 5631 XP_005267398 16 5631 XP_006717248 16 5631 XP_006717247 16 5631 XP_006717246 16 5631 XP_006717245 16 5631 XP_006717244 16 5631 XP_006717243 16 5631 XP_006717242 16 5631 XP_005263378 16 5631 NP_003719 16 5631 NP_002184 16 7355 NP_001171835 16 7355 NP_116264 16 7355 XP_005257804 16 7355 XP_005257803 16 7355 NP_653326 15 9605 NP_038469 15 9605 NP_001238911 15 9605 NP_001238909 15 9605 NP_001238908 15 9605 NP_001238906 15 9605 NP_002429 15 9605 NP_071400 15 9605 NP_001238903 15 9605 NP_001238907 15 9605 NP_005813 15 9605 NP_001238902 15 9605 NP_060024 15 9605 XP_006726575 15 9605 XP_006724655 15 9605 XP_005269821 15 9605 XP_006715011 15 9605 XP_005248316 15 9605 XP_006714512 15 9605 XP_006714511 15 9605 XP_006714510 15 9605 XP_005270777 15 9605 XP_006710615 15 9605 XP_005270776 15 9605 NP_001121687 15 9605 NP_694991 15 9605>NP_000305 Length = 403 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N KVKLYFT Sbjct: 340 NFKVKLYFT 348>XP_006717989 Length = 388 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N KVKLYFT Sbjct: 325 NFKVKLYFT 333>NP_001153844 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KVKL F+ Sbjct: 791 NIKVKLDFS 799>NP_113654 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KVKL F+ Sbjct: 889 NIKVKLDFS 897>NP_002604 Length = 556 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLYFT Sbjct: 143 VKLYFT 148>NP_001248745 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLYFT Sbjct: 143 VKLYFT 148>NP_060341 Length = 600 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 260 NLKVPIYFS 268>NP_001243391 Length = 502 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 162 NLKVPIYFS 170>NP_001243389 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 231 NLKVPIYFS 239>NP_001243392 Length = 499 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 159 NLKVPIYFS 167>NP_001243385 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 266 NLKVPIYFS 274>XP_005255413 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLYFT Sbjct: 116 VKLYFT 121>XP_006716727 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KVKL F+ Sbjct: 782 NIKVKLDFS 790>XP_005251134 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KVKL F+ Sbjct: 791 NIKVKLDFS 799>XP_005244820 Length = 502 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 162 NLKVPIYFS 170>XP_006710778 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+KV +YF+ Sbjct: 260 NLKVPIYFS 268>XP_005275825 Length = 218 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLYFT Sbjct: 116 VKLYFT 121>XP_003960932 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLYFT Sbjct: 116 VKLYFT 121>XP_006710060 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLYFT Sbjct: 116 VKLYFT 121>NP_060719 Length = 1893 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>NP_001258968 Length = 1663 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>NP_001011649 Length = 1814 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>NP_705932 Length = 622 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 NVK++ +FT Sbjct: 248 NVKMQAFFT 256>NP_705934 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 NVK++ +FT Sbjct: 184 NVKMQAFFT 192>NP_705933 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 NVK++ +FT Sbjct: 248 NVKMQAFFT 256>XP_005267399 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 NVK++ +FT Sbjct: 100 NVKMQAFFT 108>XP_005267398 Length = 622 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 NVK++ +FT Sbjct: 248 NVKMQAFFT 256>XP_006717248 Length = 1664 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>XP_006717247 Length = 1670 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>XP_006717246 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>XP_006717245 Length = 1861 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>XP_006717244 Length = 1867 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 76 NLKLRIYF 83>XP_006717243 Length = 1889 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 66 NLKLRIYF 73>XP_006717242 Length = 1898 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 N+K+++YF Sbjct: 75 NLKLRIYF 82>XP_005263378 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+K+K+Y T Sbjct: 495 NLKIKVYNT 503>NP_003719 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVKVKLYFT 9 N+K+K+Y T Sbjct: 476 NLKIKVYNT 484>NP_002184 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKVKLYF 8 V+VK+YF Sbjct: 197 VRVKVYF 203>NP_001171835 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NVKVKLYF 8 N+KV YF Sbjct: 374 NIKVHAYF 381>NP_116264 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NVKVKLYF 8 N+KV YF Sbjct: 406 NIKVHAYF 413>XP_005257804 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NVKVKLYF 8 N+KV YF Sbjct: 376 NIKVHAYF 383>XP_005257803 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NVKVKLYF 8 N+KV YF Sbjct: 408 NIKVHAYF 415>NP_653326 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLY+T Sbjct: 164 VKLYYT 169>NP_038469 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 116 KLKLYF 121>NP_001238911 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 116 KLKLYF 121>NP_001238909 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 116 KLKLYF 121>NP_001238908 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 116 KLKLYF 121>NP_001238906 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 116 KLKLYF 121>NP_002429 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 ++K+++YF Sbjct: 428 DIKIQMYF 435>NP_071400 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 307 KMKLYF 312>NP_001238903 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 126 KLKLYF 131>NP_001238907 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 116 KLKLYF 121>NP_005813 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 80 KLKLYF 85>NP_001238902 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 126 KLKLYF 131>NP_060024 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NVKVKLYF 8 N K+++YF Sbjct: 24 NTKLQMYF 31>XP_006726575 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NVKVKLYF 8 ++K+++YF Sbjct: 312 DIKIQMYF 319>XP_006724655 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 307 KMKLYF 312>XP_005269821 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+K+YF Sbjct: 180 KIKMYF 185>XP_006715011 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+KLYF Sbjct: 126 KLKLYF 131>XP_005248316 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLY+T Sbjct: 173 VKLYYT 178>XP_006714512 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLY+T Sbjct: 181 VKLYYT 186>XP_006714511 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLY+T Sbjct: 181 VKLYYT 186>XP_006714510 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKLYFT 9 VKLY+T Sbjct: 181 VKLYYT 186>XP_005270777 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+K+YF Sbjct: 260 KIKIYF 265>XP_006710615 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+K+YF Sbjct: 232 KIKIYF 237>XP_005270776 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+K+YF Sbjct: 232 KIKIYF 237>NP_001121687 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+K+YF Sbjct: 205 KIKMYF 210>NP_694991 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KVKLYF 8 K+K+YF Sbjct: 260 KIKIYF 265Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.141 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,496 Number of extensions: 635 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |