Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 21 175 NP_612404 17 2528 NP_000706 17 3301 XP_005273308 17 3301 XP_005273309 17 3301 NP_065976 17 4312 NP_004200 17 4312 NP_065845 17 4312 NP_002636 17 4312 XP_005253037 17 4312 XP_005253036 17 4312 XP_005253035 17 4312 XP_005253034 17 4312 XP_006710856 17 4312 XP_006710845 17 4312 NP_666533 16 5631 NP_000552 16 5631 XP_005270841 16 5631 XP_005270839 16 5631 NP_000839 16 5631 NP_000841 16 5631 NP_671489 16 5631 NP_001135840 16 5631 NP_000842 16 5631 NP_075462 16 7355 NP_001166281 16 7355 NP_653267 16 7355 NP_077741 16 7355 NP_001932 16 7355 XP_006723289 16 7355 XP_005257635 16 7355 NP_057043 15 9605 NP_001074930 15 9605 NP_055982 15 9605 NP_055736 15 9605 NP_068817 15 9605 NP_001008701 15 9605 NP_001239160 15 9605 NP_892019 15 9605 NP_001164433 15 9605 NP_001546 15 9605 NP_001137484 15 9605 NP_001164432 15 9605 XP_006724819 15 9605 XP_006724818 15 9605 XP_005259876 15 9605 XP_006722752 15 9605 XP_005259875 15 9605 XP_006722751 15 9605 XP_005271911 15 9605 XP_006714586 15 9605>NP_004351 Length = 882 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NTRFKVGTD 9 +TRFKVGTD Sbjct: 72 DTRFKVGTD 80>NP_612404 Length = 593 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRFKVGTD 9 TRF GTD Sbjct: 86 TRFSTGTD 93>NP_000706 Length = 597 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRFKVGT 8 TRFK GT Sbjct: 69 TRFKTGT 75>XP_005273308 Length = 597 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRFKVGT 8 TRFK GT Sbjct: 69 TRFKTGT 75>XP_005273309 Length = 597 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRFKVGT 8 TRFK GT Sbjct: 69 TRFKTGT 75>NP_065976 Length = 1223 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 NT+F+ TD Sbjct: 279 NTKFQANTD 287>NP_004200 Length = 229 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RFKVGTD 9 RF++GTD Sbjct: 170 RFRLGTD 176>NP_065845 Length = 1537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTRFKVGT 8 NTR KVG+ Sbjct: 701 NTRVKVGS 708>NP_002636 Length = 1686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FKVG D Sbjct: 1134 NVMFKVGED 1142>XP_005253037 Length = 1306 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FKVG D Sbjct: 754 NVMFKVGED 762>XP_005253036 Length = 1686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FKVG D Sbjct: 1134 NVMFKVGED 1142>XP_005253035 Length = 1686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FKVG D Sbjct: 1134 NVMFKVGED 1142>XP_005253034 Length = 1686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FKVG D Sbjct: 1134 NVMFKVGED 1142>XP_006710856 Length = 978 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 NT+F+ TD Sbjct: 34 NTKFQANTD 42>XP_006710845 Length = 1492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTRFKVGT 8 NTR KVG+ Sbjct: 656 NTRVKVGS 663>NP_666533 Length = 181 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>NP_000552 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>XP_005270841 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>XP_005270839 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 14 NEKFKLGLD 22>NP_000839 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>NP_000841 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>NP_671489 Length = 195 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>NP_001135840 Length = 191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>NP_000842 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N +FK+G D Sbjct: 48 NEKFKLGLD 56>NP_075462 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRFKVGTD 9 T+F VGT+ Sbjct: 331 TKFMVGTE 338>NP_001166281 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRFKVGTD 9 T+F VGT+ Sbjct: 331 TKFMVGTE 338>NP_653267 Length = 4753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 N+RFKV D Sbjct: 1285 NSRFKVMDD 1293>NP_077741 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FK+ TD Sbjct: 401 NGHFKISTD 409>NP_001932 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N FK+ TD Sbjct: 401 NGHFKISTD 409>XP_006723289 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRFKVGTD 9 TRF GT+ Sbjct: 138 TRFSAGTE 145>XP_005257635 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRFKVGTD 9 T+F VGT+ Sbjct: 331 TKFMVGTE 338>NP_057043 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTRFKVGT 8 +TR+KV T Sbjct: 203 STRYKVST 210>NP_001074930 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N +FK G D Sbjct: 96 NQKFKCGED 104>NP_055982 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTRFKVGTD 9 N +FK G D Sbjct: 96 NQKFKCGED 104>NP_055736 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTRFKVGT 8 NTR+ GT Sbjct: 1133 NTRYYTGT 1140>NP_068817 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NTRFKVG 7 NTR K+G Sbjct: 539 NTRTKIG 545>NP_001008701 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTRFKVGT 8 NTR+ GT Sbjct: 1138 NTRYYTGT 1145>NP_001239160 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NTRFKVG 7 NTR K+G Sbjct: 539 NTRTKIG 545>NP_892019 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FKVGTD 9 FKVGT+ Sbjct: 135 FKVGTE 140>NP_001164433 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 +T FK+G D Sbjct: 1161 STMFKLGKD 1169>NP_001546 Length = 1336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 +T FK+G D Sbjct: 1170 STMFKLGKD 1178>NP_001137484 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTRFKVGT 8 +TR+KV T Sbjct: 165 STRYKVST 172>NP_001164432 Length = 1341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 +T FK+G D Sbjct: 1175 STMFKLGKD 1183>XP_006724819 Length = 1253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 +T FK+G D Sbjct: 1087 STMFKLGKD 1095>XP_006724818 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTRFKVGTD 9 +T FK+G D Sbjct: 1138 STMFKLGKD 1146>XP_005259876 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTRFKVGT 8 NTR+ GT Sbjct: 1138 NTRYYTGT 1145>XP_006722752 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTRFKVGT 8 NTR+ GT Sbjct: 1102 NTRYYTGT 1109>XP_005259875 Length = 1493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTRFKVGT 8 NTR+ GT Sbjct: 1133 NTRYYTGT 1140>XP_006722751 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTRFKVGT 8 NTR+ GT Sbjct: 1138 NTRYYTGT 1145>XP_005271911 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NTRFKVG 7 NTR K+G Sbjct: 539 NTRTKIG 545>XP_006714586 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NTRFKVG 7 NTR K+G Sbjct: 481 NTRTKIG 487Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 514,232 Number of extensions: 952 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |