Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_919047 20 299 XP_005250598 20 299 NP_443086 18 1135 NP_112572 17 3301 NP_705833 17 3301 XP_005247174 17 3301 NP_115766 17 4312 NP_060862 17 4312 XP_005263172 17 4312 NP_000005 16 5631 XP_006719119 16 5631 NP_001159719 16 7355 NP_068775 16 7355 NP_786944 16 7355 NP_055178 16 7355 NP_001269524 16 7355 NP_067004 16 7355 NP_001269518 16 7355 NP_001264984 16 7355 NP_001269519 16 7355 NP_001269523 16 7355 NP_001269520 16 7355 NP_000822 16 7355 NP_653316 16 7355 XP_005266395 16 7355 XP_005267003 16 7355 XP_006715528 16 7355 XP_005267002 16 7355 XP_005264948 16 7355 XP_005264946 16 7355 XP_005245443 16 7355 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_612486 15 9605 NP_001157281 15 9605 NP_653319 15 9605 NP_055844 15 9605 NP_001139332 15 9605 NP_775894 15 9605 NP_001124390 15 9605 NP_542394 15 9605 NP_005638 15 9605 NP_112494 15 9605 XP_006725317 15 9605 XP_006721892 15 9605 XP_006721891 15 9605 XP_006721890 15 9605 XP_005256511 15 9605 XP_005254235 15 9605 XP_005254233 15 9605 XP_005254234 15 9605 XP_006713578 15 9605 NP_001139333 15 9605 NP_001132940 15 9605 NP_001132938 15 9605 NP_001132939 15 9605>NP_919047 Length = 520 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NTNRTLLQR 9 NTNRTLLQ+ Sbjct: 345 NTNRTLLQQ 353>XP_005250598 Length = 457 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NTNRTLLQR 9 NTNRTLLQ+ Sbjct: 282 NTNRTLLQQ 290>NP_443086 Length = 519 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NTNRTLLQR 9 N NRTLLQ+ Sbjct: 341 NANRTLLQQ 349>NP_112572 Length = 515 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 NT+RTLL+ Sbjct: 478 NTSRTLLE 485>NP_705833 Length = 2970 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TNRTLLQR 9 +NRTL+QR Sbjct: 416 SNRTLVQR 423>XP_005247174 Length = 2679 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TNRTLLQR 9 +NRTL+QR Sbjct: 125 SNRTLVQR 132>NP_115766 Length = 293 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTNRTLLQR 9 N NRTL Q+ Sbjct: 150 NRNRTLTQK 158>NP_060862 Length = 2104 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TNRTLLQR 9 TNRTLL++ Sbjct: 1775 TNRTLLKQ 1782>XP_005263172 Length = 2104 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TNRTLLQR 9 TNRTLL++ Sbjct: 1775 TNRTLLKQ 1782>NP_000005 Length = 1474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTNRTLLQR 9 N NR LLQ+ Sbjct: 1294 NNNRLLLQQ 1302>XP_006719119 Length = 1512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTNRTLLQR 9 N NR LLQ+ Sbjct: 1294 NNNRLLLQQ 1302>NP_001159719 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 65 NRNRTLL 71>NP_068775 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 65 NRNRTLL 71>NP_786944 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 65 NRNRTLL 71>NP_055178 Length = 4579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NTNRTLLQ 8 N N TLLQ Sbjct: 1136 NKNHTLLQ 1143>NP_001269524 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 155 HTNRTILK 162>NP_067004 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 289 HTNRTILK 296>NP_001269518 Length = 204 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 158 HTNRTILK 165>NP_001264984 Length = 4432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NTNRTLLQ 8 N N TLLQ Sbjct: 989 NKNHTLLQ 996>NP_001269519 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 182 HTNRTILK 189>NP_001269523 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 195 HTNRTILK 202>NP_001269520 Length = 188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 142 HTNRTILK 149>NP_000822 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 68 NRNRTLL 74>NP_653316 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNRTLLQR 9 N +RT++QR Sbjct: 78 NISRTVMQR 86>XP_005266395 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NTNRTLLQ 8 N N TLLQ Sbjct: 1145 NKNHTLLQ 1152>XP_005267003 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 16 NRNRTLL 22>XP_006715528 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 65 NRNRTLL 71>XP_005267002 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 N NRTLL Sbjct: 65 NRNRTLL 71>XP_005264948 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNRTLLQR 9 N +RT++QR Sbjct: 78 NISRTVMQR 86>XP_005264946 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNRTLLQR 9 N +RT++QR Sbjct: 78 NISRTVMQR 86>XP_005245443 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNRTLLQ 8 +TNRT+L+ Sbjct: 249 HTNRTILK 256>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTNRTLLQR 9 N NR LQR Sbjct: 1904 NANRRKLQR 1912>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTNRTLLQR 9 N NR LQR Sbjct: 1897 NANRRKLQR 1905>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTNRTLLQR 9 N NR LQR Sbjct: 1904 NANRRKLQR 1912>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTNRTLLQR 9 N NR LQR Sbjct: 1897 NANRRKLQR 1905>NP_612486 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 677 RTLLQR 682>NP_001157281 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 88 RTLLQR 93>NP_653319 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNRTLLQR 9 TN +L+QR Sbjct: 658 TNESLIQR 665>NP_055844 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TNRTLLQ 8 TNR LLQ Sbjct: 239 TNRCLLQ 245>NP_001139332 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TNRTLLQ 8 TNR LLQ Sbjct: 239 TNRCLLQ 245>NP_775894 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTNRTLLQ 8 NTN TLL+ Sbjct: 450 NTNWTLLK 457>NP_001124390 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTNRTLLQ 8 NTN TLL+ Sbjct: 757 NTNWTLLK 764>NP_542394 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TNRTLLQR 9 T RTLLQ+ Sbjct: 275 TYRTLLQK 282>NP_005638 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 NTN TLL Sbjct: 297 NTNGTLL 303>NP_112494 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNRTLLQR 9 N N+ +LQR Sbjct: 791 NDNKDILQR 799>XP_006725317 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 88 RTLLQR 93>XP_006721892 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTNRTLLQ 8 NTN TLL+ Sbjct: 709 NTNWTLLK 716>XP_006721891 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTNRTLLQ 8 NTN TLL+ Sbjct: 757 NTNWTLLK 764>XP_006721890 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTNRTLLQ 8 NTN TLL+ Sbjct: 757 NTNWTLLK 764>XP_005256511 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 88 RTLLQR 93>XP_005254235 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 678 RTLLQR 683>XP_005254233 Length = 1228 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 678 RTLLQR 683>XP_005254234 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLLQR 9 RTLLQR Sbjct: 678 RTLLQR 683>XP_006713578 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNRTLLQR 9 TN +L+QR Sbjct: 658 TNESLIQR 665>NP_001139333 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TNRTLLQ 8 TNR LLQ Sbjct: 239 TNRCLLQ 245>NP_001132940 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 NTN TLL Sbjct: 246 NTNGTLL 252>NP_001132938 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 NTN TLL Sbjct: 297 NTNGTLL 303>NP_001132939 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTNRTLL 7 NTN TLL Sbjct: 246 NTNGTLL 252Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.125 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,880 Number of extensions: 1287 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |