Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_775866 17 2528 XP_006726568 17 4312 XP_006717420 17 4312 XP_006710277 17 4312 NP_001243323 16 7355 NP_060418 16 7355 XP_006722279 16 7355 XP_006722278 16 7355 XP_005257947 16 7355 XP_005257945 16 7355 XP_006722277 16 7355 XP_006717236 16 7355 XP_006717235 16 7355 XP_006717234 16 7355 XP_006717233 16 7355 XP_006717232 16 7355 XP_006717231 16 7355 XP_006717230 16 7355 XP_006717229 16 7355 NP_006395 15 9605 NP_002221 15 9605 NP_006493 15 9605 NP_068831 15 9605 NP_001278425 15 9605 NP_001035531 15 9605 NP_660333 15 9605 NP_569057 15 9605 NP_733787 15 9605 NP_065832 15 9605 XP_006723745 15 9605 XP_006722421 15 9605 XP_006721941 15 9605 XP_006721940 15 9605 XP_006721939 15 9605 XP_006721938 15 9605 XP_006721937 15 9605 XP_006721936 15 9605 XP_006721935 15 9605 XP_006721934 15 9605 XP_005257370 15 9605 XP_006715181 15 9605 XP_005249243 15 9605 XP_005248194 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 204 NTNDVETAR 212>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 204 NTNDVETAR 212>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 204 NTNDVETAR 212>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 204 NTNDVETAR 212>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 197 NTNDVETAR 205>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 197 NTNDVETAR 205>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NTN VETAR Sbjct: 204 NTNDVETAR 212>NP_775866 Length = 1076 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TNGVETAR 9 TNG +TAR Sbjct: 360 TNGADTAR 367>XP_006726568 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNGVETA 8 NTNGV+++ Sbjct: 61 NTNGVDSS 68>XP_006717420 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNGVETA 8 NTNGV+++ Sbjct: 61 NTNGVDSS 68>XP_006710277 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTNGVETA 8 NTNGV+++ Sbjct: 61 NTNGVDSS 68>NP_001243323 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 217 TSGLETAK 224>NP_060418 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 285 TSGLETAK 292>XP_006722279 Length = 1578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT+G T+R Sbjct: 85 NTSGASTSR 93>XP_006722278 Length = 1735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT+G T+R Sbjct: 242 NTSGASTSR 250>XP_005257947 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT+G T+R Sbjct: 477 NTSGASTSR 485>XP_005257945 Length = 1969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT+G T+R Sbjct: 477 NTSGASTSR 485>XP_006722277 Length = 1970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT+G T+R Sbjct: 477 NTSGASTSR 485>XP_006717236 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 159 TSGLETAK 166>XP_006717235 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 159 TSGLETAK 166>XP_006717234 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 159 TSGLETAK 166>XP_006717233 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 217 TSGLETAK 224>XP_006717232 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 217 TSGLETAK 224>XP_006717231 Length = 1129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 285 TSGLETAK 292>XP_006717230 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 285 TSGLETAK 292>XP_006717229 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNGVETAR 9 T+G+ETA+ Sbjct: 285 TSGLETAK 292>NP_006395 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT G +T+R Sbjct: 198 NTKGSQTSR 206>NP_002221 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>NP_006493 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NTNGVET 7 NT+G++T Sbjct: 407 NTSGIQT 413>NP_068831 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>NP_001278425 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTNGVE 6 N+NGVE Sbjct: 141 NSNGVE 146>NP_001035531 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTNGVE 6 N+NGVE Sbjct: 141 NSNGVE 146>NP_660333 Length = 1321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNGVETAR 9 TN V TAR Sbjct: 435 TNAVATAR 442>NP_569057 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNGVETAR 9 T G+ET+R Sbjct: 69 TGGMETSR 76>NP_733787 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NTNGVET 7 NT G+ET Sbjct: 623 NTEGLET 629>NP_065832 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NTNGVET 7 NT G+ET Sbjct: 452 NTEGLET 458>XP_006723745 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTNGVETAR 9 NT G +T+R Sbjct: 235 NTKGSQTSR 243>XP_006722421 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNGVETAR 9 T G+ET+R Sbjct: 69 TGGMETSR 76>XP_006721941 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>XP_006721940 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>XP_006721939 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>XP_006721938 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>XP_006721937 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>XP_006721936 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 195 NTSDLDTAR 203>XP_006721935 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 212 NTSDLDTAR 220>XP_006721934 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 233 NTSDLDTAR 241>XP_005257370 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTNGVETAR 9 NT+ ++TAR Sbjct: 233 NTSDLDTAR 241>XP_006715181 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NTNGVET 7 NT+G++T Sbjct: 255 NTSGIQT 261>XP_005249243 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NTNGVET 7 NT+G++T Sbjct: 345 NTSGIQT 351>XP_005248194 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNGVETAR 9 TN V TAR Sbjct: 435 TNAVATAR 442Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.114 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 599,127 Number of extensions: 1183 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |