Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 22 134 NP_006222 17 2528 NP_149017 17 4312 NP_001239607 17 4312 NP_001269042 17 4312 NP_001269041 17 4312 NP_003926 17 4312 XP_006724415 17 4312 XP_005261871 17 4312 XP_005261870 17 4312 XP_006724414 17 4312 XP_005261868 17 4312 XP_006724413 17 4312 XP_006724412 17 4312 XP_006720688 17 4312 XP_006720687 17 4312 XP_006720686 17 4312 NP_005517 16 5631 NP_620687 16 5631 XP_005272373 16 5631 XP_005272372 16 5631 NP_005667 16 7355 NP_690595 16 7355 NP_000618 16 7355 NP_996826 16 7355 NP_001159737 16 7355 NP_001600 16 7355 NP_001191396 16 7355 NP_002449 16 7355 NP_001191395 16 7355 NP_001191397 16 7355 XP_005272736 16 7355 XP_005272735 16 7355 XP_005272734 16 7355 XP_006713927 16 7355 XP_006712082 16 7355 XP_005264374 16 7355 XP_005264373 16 7355 NP_660334 16 7355 NP_079023 15 9605 NP_060252 15 9605 NP_570720 15 9605 NP_060149 15 9605 NP_003162 15 9605 NP_001092902 15 9605 NP_001276041 15 9605 NP_631903 15 9605 NP_702907 15 9605 XP_005257534 15 9605 XP_005257533 15 9605 XP_005257532 15 9605 XP_005257531 15 9605 XP_005257530 15 9605 XP_005257529 15 9605 XP_005252540 15 9605 XP_005252539 15 9605 XP_005252538 15 9605 XP_005252537 15 9605 XP_005252535 15 9605 XP_005252534 15 9605 XP_006717515 15 9605 XP_005252533 15 9605 XP_005252532 15 9605 XP_005252531 15 9605 XP_005271938 15 9605>NP_004295 Length = 1620 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NTMMQSHGV 9 NTMM+SHGV Sbjct: 749 NTMMRSHGV 757>NP_006222 Length = 2286 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTMMQSHGV 9 NT++QSH V Sbjct: 1737 NTILQSHHV 1745>NP_149017 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMMQSHG 8 +MMQ+HG Sbjct: 244 SMMQTHG 250>NP_001239607 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMMQSHG 8 +MMQ+HG Sbjct: 72 SMMQTHG 78>NP_001269042 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>NP_001269041 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>NP_003926 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006724415 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_005261871 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_005261870 Length = 726 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 365 TLMEKHGI 372>XP_006724414 Length = 730 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_005261868 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006724413 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006724412 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 T+M+ HG+ Sbjct: 501 TLMEKHGI 508>XP_006720688 Length = 496 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMMQSHG 8 +MMQ+HG Sbjct: 221 SMMQTHG 227>XP_006720687 Length = 504 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMMQSHG 8 +MMQ+HG Sbjct: 229 SMMQTHG 235>XP_006720686 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMMQSHG 8 +MMQ+HG Sbjct: 232 SMMQTHG 238>NP_005517 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TMMQSHG 8 TM+ SHG Sbjct: 400 TMLSSHG 406>NP_620687 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MMQSHG 8 MMQ+HG Sbjct: 302 MMQNHG 307>XP_005272373 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TMMQSHG 8 TM+ SHG Sbjct: 428 TMLSSHG 434>XP_005272372 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TMMQSHG 8 TM+ SHG Sbjct: 428 TMLSSHG 434>NP_005667 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 149 LQSHGV 154>NP_690595 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 72 LQSHGV 77>NP_000618 Length = 1395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NT+ SHG Sbjct: 925 NTVCDSHG 932>NP_996826 Length = 1721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NT+ SHG Sbjct: 1251 NTVCDSHG 1258>NP_001159737 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NT+ SHG Sbjct: 872 NTVCDSHG 879>NP_001600 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NTMMQSHG 8 NT+++ HG Sbjct: 147 NTLIRKHG 154>NP_001191396 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 149 LQSHGV 154>NP_002449 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NTM +HG Sbjct: 2192 NTMATTHG 2199>NP_001191395 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 72 LQSHGV 77>NP_001191397 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 214 LQSHGV 219>XP_005272736 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 137 LQSHGV 142>XP_005272735 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 137 LQSHGV 142>XP_005272734 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MQSHGV 9 +QSHGV Sbjct: 214 LQSHGV 219>XP_006713927 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 +M+Q HGV Sbjct: 657 SMIQPHGV 664>XP_006712082 Length = 1314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NT+ SHG Sbjct: 844 NTVCDSHG 851>XP_005264374 Length = 1668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NT+ SHG Sbjct: 1198 NTVCDSHG 1205>XP_005264373 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NTMMQSHG 8 NT+ SHG Sbjct: 1209 NTVCDSHG 1216>NP_660334 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TMMQSHGV 9 +M+Q HGV Sbjct: 657 SMIQPHGV 664>NP_079023 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TMMQSHG 8 +++QSHG Sbjct: 290 SLLQSHG 296>NP_060252 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>NP_570720 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MQSHG 8 MQSHG Sbjct: 52 MQSHG 56>NP_060149 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 747 SSVLQSHG 754>NP_003162 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 N +MQSH + Sbjct: 129 NYIMQSHSL 137>NP_001092902 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 762 SSVLQSHG 769>NP_001276041 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MQSHG 8 MQSHG Sbjct: 70 MQSHG 74>NP_631903 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 NT++Q H + Sbjct: 16 NTLIQYHSI 24>NP_702907 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MQSHG 8 MQSHG Sbjct: 70 MQSHG 74>XP_005257534 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 762 SSVLQSHG 769>XP_005257533 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 762 SSVLQSHG 769>XP_005257532 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 747 SSVLQSHG 754>XP_005257531 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 747 SSVLQSHG 754>XP_005257530 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 762 SSVLQSHG 769>XP_005257529 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NTMMQSHG 8 ++++QSHG Sbjct: 762 SSVLQSHG 769>XP_005252540 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>XP_005252539 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>XP_005252538 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>XP_005252537 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>XP_005252535 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>XP_005252534 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 2027 DTMRTSHGL 2035>XP_006717515 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 2027 DTMRTSHGL 2035>XP_005252533 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 2027 DTMRTSHGL 2035>XP_005252532 Length = 2430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 1936 DTMRTSHGL 1944>XP_005252531 Length = 2670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 +TM SHG+ Sbjct: 2176 DTMRTSHGL 2184>XP_005271938 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 NTMMQSHGV 9 NT++Q H + Sbjct: 16 NTLIQYHSI 24Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.116 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 478,762 Number of extensions: 501 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |