Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 299 NP_689718 17 2528 XP_006724036 17 2528 XP_006724035 17 2528 XP_006724034 17 2528 XP_006724033 17 2528 XP_006724032 17 2528 XP_006724031 17 2528 XP_005260983 17 2528 XP_006724030 17 2528 NP_001935 17 2528 NP_778203 17 3301 NP_001834 17 3301 XP_006719304 17 3301 XP_005268708 17 3301 XP_005272419 17 3301 NP_001164102 17 4312 XP_005273343 17 4312 NP_001268421 16 5631 NP_000170 16 5631 NP_001268422 16 5631 NP_001268423 16 5631 NP_005637 16 5631 NP_055192 16 5631 NP_001123359 16 5631 NP_059982 16 5631 NP_974487 16 5631 XP_005264328 16 5631 XP_006711875 16 5631 XP_005273291 16 5631 NP_003638 16 7355 NP_001265522 16 7355 NP_005580 16 7355 NP_001265523 16 7355 XP_005257806 16 7355 XP_006722206 16 7355 XP_005255101 16 7355 NP_150296 16 7355 NP_000313 15 9605 NP_055655 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_001186978 15 9605 NP_596869 15 9605 NP_003122 15 9605 NP_060538 15 9605 NP_001129193 15 9605 NP_006178 15 9605 NP_112214 15 9605 XP_005259653 15 9605 XP_005253946 15 9605 XP_006717202 15 9605 XP_005273608 15 9605 XP_005273607 15 9605 XP_005249318 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_064555 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_003290 Length = 803 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLGRGTAI 9 NTLGRGT I Sbjct: 239 NTLGRGTTI 247>NP_689718 Length = 670 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 504 DTLGKGTA 511>XP_006724036 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 374 DTLGKGTA 381>XP_006724035 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 374 DTLGKGTA 381>XP_006724034 Length = 624 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 458 DTLGKGTA 465>XP_006724033 Length = 670 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 504 DTLGKGTA 511>XP_006724032 Length = 670 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 504 DTLGKGTA 511>XP_006724031 Length = 670 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 504 DTLGKGTA 511>XP_005260983 Length = 670 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 504 DTLGKGTA 511>XP_006724030 Length = 670 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NTLGRGTA 8 +TLG+GTA Sbjct: 504 DTLGKGTA 511>NP_001935 Length = 999 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTLGRGTAI 9 NT RGTA+ Sbjct: 705 NTYARGTAV 713>NP_778203 Length = 1007 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLGRG Sbjct: 674 NTLGRG 679>NP_001834 Length = 1018 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLGRG Sbjct: 685 NTLGRG 690>XP_006719304 Length = 1018 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLGRG Sbjct: 685 NTLGRG 690>XP_005268708 Length = 1018 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLGRG Sbjct: 685 NTLGRG 690>XP_005272419 Length = 216 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLGRG Sbjct: 206 NTLGRG 211>NP_001164102 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 TLG+GTA Sbjct: 255 TLGQGTA 261>XP_005273343 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 TLG+GTA Sbjct: 255 TLGQGTA 261>NP_001268421 Length = 1230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRGTA 8 LGRGTA Sbjct: 1085 LGRGTA 1090>NP_000170 Length = 1360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRGTA 8 LGRGTA Sbjct: 1215 LGRGTA 1220>NP_001268422 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRGTA 8 LGRGTA Sbjct: 913 LGRGTA 918>NP_001268423 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRGTA 8 LGRGTA Sbjct: 913 LGRGTA 918>NP_005637 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TLGRGTAI 9 +LGRGT++ Sbjct: 564 SLGRGTSL 571>NP_055192 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GRGTAI 9 GRGTAI Sbjct: 10 GRGTAI 15>NP_001123359 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GRGTAI 9 GRGTAI Sbjct: 10 GRGTAI 15>NP_059982 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TLGRGTAI 9 TLG+GT + Sbjct: 57 TLGKGTEV 64>NP_974487 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TLGRGTAI 9 TLG+GT + Sbjct: 78 TLGKGTEV 85>XP_005264328 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRGTA 8 LGRGTA Sbjct: 1116 LGRGTA 1121>XP_006711875 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TLGRGTAI 9 +LGRGT++ Sbjct: 108 SLGRGTSL 115>XP_005273291 Length = 1620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TLGRGTAI 9 +LGRGT++ Sbjct: 564 SLGRGTSL 571>NP_003638 Length = 567 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTLGRGT 7 NTLG GT Sbjct: 318 NTLGWGT 324>NP_001265522 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N G GTAI Sbjct: 428 NPYGNGTAI 436>NP_005580 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N G GTAI Sbjct: 441 NPYGNGTAI 449>NP_001265523 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N G GTAI Sbjct: 287 NPYGNGTAI 295>XP_005257806 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTLGRGT 7 NTLG GT Sbjct: 318 NTLGWGT 324>XP_006722206 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NTLGRGT 7 NTLG GT Sbjct: 318 NTLGWGT 324>XP_005255101 Length = 922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TLGRGTA 8 TLG GTA Sbjct: 427 TLGSGTA 433>NP_150296 Length = 974 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TLGRGTA 8 TLG GTA Sbjct: 427 TLGSGTA 433>NP_000313 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLG+G Sbjct: 128 NTLGQG 133>NP_055655 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TLGRGT 7 TLG+GT Sbjct: 60 TLGKGT 65>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 7270 NVCGRATAV 7278>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 7395 NVCGRATAV 7403>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 14694 NVCGRATAV 14702>NP_001186978 Length = 2715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 NTL RG I Sbjct: 788 NTLARGLII 796>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 13767 NVCGRATAV 13775>NP_003122 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGRGTAI 9 LGRG+A+ Sbjct: 12 LGRGSAL 18>NP_060538 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 TLGRG++ Sbjct: 143 TLGRGSS 149>NP_001129193 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 TLGRG++ Sbjct: 143 TLGRGSS 149>NP_006178 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GRGTAI 9 GRGTA+ Sbjct: 64 GRGTAL 69>NP_112214 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TLGRGT 7 TLG+GT Sbjct: 58 TLGKGT 63>XP_005259653 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 NTLGRGTAI 9 +T+GRG+++ Sbjct: 312 DTVGRGSSL 320>XP_005253946 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GRGTAI 9 GRGTA+ Sbjct: 64 GRGTAL 69>XP_006717202 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 ++GRGTA Sbjct: 143 SVGRGTA 149>XP_005273608 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 TLGRG++ Sbjct: 143 TLGRGSS 149>XP_005273607 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLGRGTA 8 TLGRG++ Sbjct: 143 TLGRGSS 149>XP_005249318 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTLGRG 6 NTLG+G Sbjct: 128 NTLGQG 133>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 3007 NVCGRATAV 3015>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 4366 NVCGRATAV 4374>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 14322 NVCGRATAV 14330>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 15828 NVCGRATAV 15836>NP_064555 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 NTLGRGTAI 9 +T+GRG+++ Sbjct: 312 DTVGRGSSL 320>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 16335 NVCGRATAV 16343>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTLGRGTAI 9 N GR TA+ Sbjct: 7462 NVCGRATAV 7470Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.135 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,353 Number of extensions: 823 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |