Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721991 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_689670 17 3301 XP_006710508 17 3301 XP_006710507 17 3301 NP_689910 17 3301 NP_001123530 17 3301 NP_006840 17 4312 NP_000548 16 5631 NP_659436 16 5631 XP_006722338 16 5631 NP_001001557 16 7355 NP_002729 16 7355 NP_997700 16 7355 NP_001153239 16 7355 NP_054757 16 7355 NP_056052 16 7355 NP_006659 16 7355 XP_005267331 16 7355 XP_006715771 16 7355 XP_006715770 16 7355 XP_006715769 16 7355 NP_777557 16 7355 NP_061720 16 7355 NP_000431 15 9605 NP_569733 15 9605 NP_904324 15 9605 NP_002431 15 9605 NP_057169 15 9605 NP_060358 15 9605 NP_542159 15 9605 NP_001164266 15 9605 NP_775922 15 9605 XP_006721119 15 9605 XP_006721118 15 9605 XP_006719745 15 9605 XP_006719744 15 9605 XP_005254044 15 9605 XP_006715527 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 939 NTISKFFDS 947>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 939 NTISKFFDS 947>XP_006721991 Length = 1632 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 949 NTISKFFDS 957>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 949 NTISKFFDS 957>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 949 NTISKFFDS 957>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 939 NTISKFFDS 947>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 949 NTISKFFDS 957>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 949 NTISKFFDS 957>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 936 NTISKFFDS 944>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 939 NTISKFFDS 947>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTISKF DS Sbjct: 949 NTISKFFDS 957>NP_689670 Length = 424 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NT+S+ LDS Sbjct: 139 NTLSEILDS 147>XP_006710508 Length = 677 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NTISKFL 7 NT+SKFL Sbjct: 503 NTLSKFL 509>XP_006710507 Length = 719 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NTISKFL 7 NT+SKFL Sbjct: 545 NTLSKFL 551>NP_689910 Length = 719 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NTISKFL 7 NT+SKFL Sbjct: 545 NTLSKFL 551>NP_001123530 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NTISKFL 7 NT+SKFL Sbjct: 545 NTLSKFL 551>NP_006840 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 T SKFLD+ Sbjct: 486 TFSKFLDN 493>NP_000548 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTISKFLD 8 NTI+ F+D Sbjct: 200 NTITSFID 207>NP_659436 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTISKFLD 8 NT+ +FLD Sbjct: 85 NTVLRFLD 92>XP_006722338 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTISKFLD 8 NT+ +FLD Sbjct: 85 NTVLRFLD 92>NP_001001557 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTISKFLD 8 NTI+ F+D Sbjct: 125 NTITSFVD 132>NP_002729 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTISKF 6 NT+SKF Sbjct: 323 NTVSKF 328>NP_997700 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTISKF 6 NT+SKF Sbjct: 323 NTVSKF 328>NP_001153239 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISKFLDS 9 ++KFLDS Sbjct: 48 VAKFLDS 54>NP_054757 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISKFLDS 9 ++KFLDS Sbjct: 48 VAKFLDS 54>NP_056052 Length = 1354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SKFLDS 9 SKFLDS Sbjct: 1132 SKFLDS 1137>NP_006659 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NTISKFL 7 NT++KFL Sbjct: 227 NTLAKFL 233>XP_005267331 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NTISKFL 7 NT++KFL Sbjct: 82 NTLAKFL 88>XP_006715771 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISKFLDS 9 ++KFLDS Sbjct: 48 VAKFLDS 54>XP_006715770 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISKFLDS 9 ++KFLDS Sbjct: 48 VAKFLDS 54>XP_006715769 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISKFLDS 9 ++KFLDS Sbjct: 48 VAKFLDS 54>NP_777557 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISKFLDS 9 ++KFLDS Sbjct: 157 VNKFLDS 163>NP_061720 Length = 4024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTISKFLD 8 +T+S FLD Sbjct: 871 STVSSFLD 878>NP_000431 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISKFLDS 9 + KFLDS Sbjct: 9 VEKFLDS 15>NP_569733 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 TIS FL+S Sbjct: 562 TISSFLNS 569>NP_904324 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 TIS FL+S Sbjct: 562 TISSFLNS 569>NP_002431 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 + IS+FLD+ Sbjct: 387 SVISRFLDT 395>NP_057169 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTI+ ++D+ Sbjct: 80 NTITSYIDN 88>NP_060358 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTISKF 6 NT+SKF Sbjct: 307 NTLSKF 312>NP_542159 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTI+ ++D+ Sbjct: 193 NTITSYIDN 201>NP_001164266 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NTISKFLDS 9 NTI+ ++D+ Sbjct: 138 NTITSYIDN 146>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 T+SK +DS Sbjct: 4131 TVSKIVDS 4138>XP_006721119 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTISKF 6 NT+SKF Sbjct: 307 NTLSKF 312>XP_006721118 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTISKF 6 NT+SKF Sbjct: 307 NTLSKF 312>XP_006719745 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 TIS FL+S Sbjct: 562 TISSFLNS 569>XP_006719744 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 TIS FL+S Sbjct: 562 TISSFLNS 569>XP_005254044 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TISKFLDS 9 TIS FL+S Sbjct: 562 TISSFLNS 569>XP_006715527 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTISKFLD 8 +TIS+FL+ Sbjct: 266 STISRFLE 273Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.127 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,467 Number of extensions: 463 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |