Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1135 XP_005253413 16 5631 XP_005253412 16 5631 NP_001635 16 5631 NP_065831 16 7355 NP_001122386 15 9605 NP_001122383 15 9605 NP_001122385 15 9605 NP_005007 15 9605 NP_001092090 15 9605 NP_114366 15 9605 NP_001122384 15 9605 NP_001274745 15 9605 NP_055662 15 9605 NP_002536 15 9605 NP_001012393 15 9605 NP_006187 15 9605 NP_001128625 15 9605 NP_001123613 15 9605 NP_065389 15 9605 XP_005271636 15 9605 XP_005271635 15 9605 XP_005271632 15 9605 XP_006718909 15 9605 XP_005271631 15 9605 XP_005273523 15 9605 XP_006716387 15 9605 XP_005273522 15 9605 XP_005273521 15 9605 XP_005273520 15 9605 XP_006716386 15 9605 XP_006711752 15 9605 XP_006711751 15 9605 XP_006711750 15 9605 XP_006711749 15 9605 XP_005245729 15 9605 XP_005245727 15 9605 XP_005245726 15 9605 XP_005245725 15 9605 XP_005245724 15 9605 XP_005245715 15 9605 XP_006711748 15 9605 XP_006711747 15 9605 XP_006711746 15 9605 XP_006711745 15 9605 XP_006711744 15 9605 XP_006711743 15 9605 XP_006711742 15 9605 NP_001121903 15 9605 NP_001128626 15 9605 NP_056174 15 9605>NP_004110 Length = 993 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TGVSIQVA 9 TGVSIQVA Sbjct: 635 TGVSIQVA 642>XP_005253413 Length = 191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTGVSIQV 8 N+GV+IQ+ Sbjct: 91 NSGVTIQI 98>XP_005253412 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTGVSIQV 8 N+GV+IQ+ Sbjct: 136 NSGVTIQI 143>NP_001635 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTGVSIQV 8 N+GV+IQ+ Sbjct: 136 NSGVTIQI 143>NP_065831 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVSI Sbjct: 1325 NTGVSI 1330>NP_001122386 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_001122383 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_001122385 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_005007 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_001092090 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_114366 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_001122384 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_001274745 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>NP_055662 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 966 NTGVSV 971>NP_002536 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 231 NTGVSV 236>NP_001012393 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 224 NTGVSV 229>NP_006187 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 126 STGAQVQVA 134>NP_001128625 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398>NP_001123613 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 158 STGAQVQVA 166>NP_065389 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 +TG +QVA Sbjct: 158 STGAQVQVA 166>XP_005271636 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 93 NTGVSV 98>XP_005271635 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 131 NTGVSV 136>XP_005271632 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 231 NTGVSV 236>XP_006718909 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 223 NTGVSV 228>XP_005271631 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 230 NTGVSV 235>XP_005273523 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398>XP_006716387 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398>XP_005273522 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398>XP_005273521 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 400 NAGMSIQQA 408>XP_005273520 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 400 NAGMSIQQA 408>XP_006716386 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 400 NAGMSIQQA 408>XP_006711752 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711751 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 626 NTGVSV 631>XP_006711750 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 736 NTGVSV 741>XP_006711749 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 771 NTGVSV 776>XP_005245729 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 966 NTGVSV 971>XP_005245727 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245726 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245725 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245724 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245715 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711748 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711747 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711746 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711745 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711744 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711743 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711742 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NTGVSI 6 NTGVS+ Sbjct: 977 NTGVSV 982>NP_001121903 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398>NP_001128626 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398>NP_056174 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTGVSIQVA 9 N G+SIQ A Sbjct: 390 NAGMSIQQA 398Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.120 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,446 Number of extensions: 507 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |