Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060695 17 3301 XP_005251560 17 3301 NP_542141 17 4312 XP_005260338 17 4312 NP_001188333 16 5631 NP_008921 16 5631 NP_003325 16 7355 NP_001129074 16 7355 NP_695012 16 7355 NP_001073279 16 7355 NP_000395 16 7355 NP_001098677 16 7355 NP_002281 16 7355 NP_000928 16 7355 NP_001098676 16 7355 NP_056288 16 7355 NP_001138633 16 7355 XP_005272707 16 7355 XP_005272706 16 7355 XP_005272705 16 7355 XP_006715544 16 7355 XP_005267041 16 7355 XP_006715543 16 7355 XP_005267040 16 7355 XP_005248304 16 7355 NP_001138389 15 9605 NP_001138390 15 9605 NP_001138386 15 9605 NP_001138387 15 9605 NP_000132 15 9605 NP_075259 15 9605 NP_001138388 15 9605 NP_001138391 15 9605 NP_001138385 15 9605 NP_075418 15 9605 NP_001156685 15 9605 NP_000133 15 9605 NP_075254 15 9605 XP_006717776 15 9605 XP_006717775 15 9605 XP_006717774 15 9605 XP_006717773 15 9605 XP_006717772 15 9605 XP_006717771 15 9605 XP_006713936 15 9605 XP_006713935 15 9605 XP_006713934 15 9605 XP_006713933 15 9605 XP_006713932 15 9605 XP_006713931 15 9605>NP_060695 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NTFKSLVSS 9 NTFKSL S+ Sbjct: 385 NTFKSLGST 393>XP_005251560 Length = 462 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NTFKSLVSS 9 NTFKSL S+ Sbjct: 334 NTFKSLGST 342>NP_542141 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 NT KS VSS Sbjct: 202 NTLKSTVSS 210>XP_005260338 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 NT KS VSS Sbjct: 202 NTLKSTVSS 210>NP_001188333 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 NTF S VSS Sbjct: 59 NTFASRVSS 67>NP_008921 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 NTF S VSS Sbjct: 59 NTFASRVSS 67>NP_003325 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFKSLVSS 9 +FKSLV+S Sbjct: 302 SFKSLVAS 309>NP_001129074 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 N FK LVS+ Sbjct: 359 NDFKGLVSN 367>NP_695012 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFKSLVSS 9 +FKSLV+S Sbjct: 302 SFKSLVAS 309>NP_001073279 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 N FK LVS+ Sbjct: 460 NDFKGLVSN 468>NP_000395 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 N FK LVS+ Sbjct: 490 NDFKGLVSN 498>NP_001098677 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 337 NTMKSLLS 344>NP_002281 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 337 NTMKSLLS 344>NP_000928 Length = 1970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTFKSLVSS 9 N FKS+V S Sbjct: 764 NNFKSMVVS 772>NP_001098676 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 344 NTMKSLLS 351>NP_056288 Length = 2046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTFKSLVSS 9 + FKSLV+S Sbjct: 1993 SVFKSLVAS 2001>NP_001138633 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFKSLVSS 9 TFKSLV + Sbjct: 140 TFKSLVKT 147>XP_005272707 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFKSLVSS 9 +FKSLV+S Sbjct: 302 SFKSLVAS 309>XP_005272706 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFKSLVSS 9 +FKSLV+S Sbjct: 308 SFKSLVAS 315>XP_005272705 Length = 1109 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFKSLVSS 9 +FKSLV+S Sbjct: 353 SFKSLVAS 360>XP_006715544 Length = 1810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 331 NTMKSLLS 338>XP_005267041 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 344 NTMKSLLS 351>XP_006715543 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 344 NTMKSLLS 351>XP_005267040 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTFKSLVS 8 NT KSL+S Sbjct: 344 NTMKSLLS 351>XP_005248304 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFKSLVSS 9 TFKSLV + Sbjct: 246 TFKSLVKT 253>NP_001138389 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 483 TFKDLVS 489>NP_001138390 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 482 TFKDLVS 488>NP_001138386 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 487 TFKDLVS 493>NP_001138387 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 510 TFKDLVS 516>NP_000132 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 599 TFKDLVS 605>NP_075259 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 600 TFKDLVS 606>NP_001138388 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 484 TFKDLVS 490>NP_001138391 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 511 TFKDLVS 517>NP_001138385 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 600 TFKDLVS 606>NP_075418 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 510 TFKDLVS 516>NP_001156685 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 592 TFKDLVS 598>NP_000133 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 590 TFKDLVS 596>NP_075254 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 478 TFKDLVS 484>XP_006717776 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 618 TFKDLVS 624>XP_006717775 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 504 TFKDLVS 510>XP_006717774 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 530 TFKDLVS 536>XP_006717773 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 619 TFKDLVS 625>XP_006717772 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 616 TFKDLVS 622>XP_006717771 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 617 TFKDLVS 623>XP_006713936 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 590 TFKDLVS 596>XP_006713935 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 591 TFKDLVS 597>XP_006713934 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 592 TFKDLVS 598>XP_006713933 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 593 TFKDLVS 599>XP_006713932 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 594 TFKDLVS 600>XP_006713931 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TFKSLVS 8 TFK LVS Sbjct: 594 TFKDLVS 600Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.112 0.265 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 385,098 Number of extensions: 815 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |