Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 299 NP_055571 17 3301 NP_001008938 17 3301 NP_954872 17 3301 NP_005436 16 7355 NP_001243748 16 7355 NP_001138923 16 7355 NP_116069 16 7355 NP_005877 16 7355 NP_001073892 16 7355 XP_005274533 16 7355 XP_006721186 16 7355 XP_005255829 16 7355 XP_006721185 16 7355 XP_006721184 16 7355 XP_005253863 16 7355 XP_006719085 16 7355 XP_006719084 16 7355 XP_006719083 16 7355 NP_001138430 16 7355 NP_055935 15 9605 NP_071351 15 9605 NP_001193420 15 9605 NP_065797 15 9605 NP_001258779 15 9605 NP_001092885 15 9605 NP_689594 15 9605 NP_036284 15 9605 NP_001254500 15 9605 NP_001254501 15 9605 NP_954863 15 9605 NP_055436 15 9605 NP_060891 15 9605 XP_003960414 15 9605 XP_005250139 15 9605 XP_003118606 15 9605 XP_005246571 15 9605 XP_006712319 15 9605 XP_006710605 15 9605 XP_003120017 15 9605 NP_001186073 15 9605 NP_570141 15 9605 NP_001135440 15 9605>NP_004295 Length = 1620 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTAFSQSNP 9 N AFSQSNP Sbjct: 1477 NMAFSQSNP 1485>NP_055571 Length = 1972 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFSQSNP 9 AFSQ NP Sbjct: 723 AFSQKNP 729>NP_001008938 Length = 2032 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFSQSNP 9 AFSQ NP Sbjct: 723 AFSQKNP 729>NP_954872 Length = 799 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTAFSQSNP 9 NTAF S+P Sbjct: 339 NTAFQPSSP 347>NP_005436 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTAFSQSNP 9 + FS+SNP Sbjct: 127 SAGFSRSNP 135>NP_001243748 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 F+QSNP Sbjct: 146 FAQSNP 151>NP_001138923 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TAFSQSNP 9 T+FS NP Sbjct: 802 TSFSDQNP 809>NP_116069 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 FSQ+NP Sbjct: 118 FSQNNP 123>NP_005877 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFSQSN 8 AFSQSN Sbjct: 289 AFSQSN 294>NP_001073892 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NTAFSQSNP 9 N AFS +NP Sbjct: 495 NHAFSCNNP 503>XP_005274533 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NTAFSQSN 8 N++FS+SN Sbjct: 586 NSSFSKSN 593>XP_006721186 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFSQSN 8 AFSQSN Sbjct: 289 AFSQSN 294>XP_005255829 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFSQSN 8 AFSQSN Sbjct: 289 AFSQSN 294>XP_006721185 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFSQSN 8 AFSQSN Sbjct: 289 AFSQSN 294>XP_006721184 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFSQSN 8 AFSQSN Sbjct: 289 AFSQSN 294>XP_005253863 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 FSQ+NP Sbjct: 118 FSQNNP 123>XP_006719085 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 FSQ+NP Sbjct: 118 FSQNNP 123>XP_006719084 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 FSQ+NP Sbjct: 118 FSQNNP 123>XP_006719083 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 FSQ+NP Sbjct: 118 FSQNNP 123>NP_001138430 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSQSNP 9 FSQ+NP Sbjct: 118 FSQNNP 123>NP_055935 Length = 4169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTAFSQSNP 9 NT SQS P Sbjct: 3018 NTVVSQSAP 3026>NP_071351 Length = 2752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AFSQSNP 9 +FSQ NP Sbjct: 1269 SFSQHNP 1275>NP_001193420 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TAFSQSNP 9 T+FS S+P Sbjct: 111 TSFSSSSP 118>NP_065797 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TAFSQSNP 9 T+FS S+P Sbjct: 252 TSFSSSSP 259>NP_001258779 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTAFSQSN 8 NT+F Q+N Sbjct: 152 NTSFIQNN 159>NP_001092885 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TAFSQSNP 9 T FSQS P Sbjct: 632 TTFSQSLP 639>NP_689594 Length = 3549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TAFSQS 7 TAFSQS Sbjct: 467 TAFSQS 472>NP_036284 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FSQSNP 9 FSQ NP Sbjct: 311 FSQENP 316>NP_001254500 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTAFSQSNP 9 N AF+ NP Sbjct: 864 NIAFNDMNP 872>NP_001254501 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTAFSQSNP 9 N AF+ NP Sbjct: 404 NIAFNDMNP 412>NP_954863 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTAFSQSN 8 NT+F Q+N Sbjct: 481 NTSFIQNN 488>NP_055436 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AFSQSNP 9 A+SQS+P Sbjct: 112 AYSQSDP 118>NP_060891 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NTAFSQSNP 9 N AF+ NP Sbjct: 853 NIAFNDMNP 861>XP_003960414 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTAFSQSNP 9 N AF+ S+P Sbjct: 57 NPAFNMSSP 65>XP_005250139 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TAFSQSNP 9 T FSQS P Sbjct: 902 TTFSQSLP 909>XP_003118606 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTAFSQSNP 9 N AF+ S+P Sbjct: 57 NPAFNMSSP 65>XP_005246571 Length = 146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AFSQSNP 9 A+SQS+P Sbjct: 112 AYSQSDP 118>XP_006712319 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TAFSQS 7 TAFSQS Sbjct: 226 TAFSQS 231>XP_006710605 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FSQSNP 9 FSQ NP Sbjct: 311 FSQENP 316>XP_003120017 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NTAFSQSNP 9 N AF+ S+P Sbjct: 57 NPAFNMSSP 65>NP_001186073 Length = 3327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TAFSQS 7 TAFSQS Sbjct: 245 TAFSQS 250>NP_570141 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTAFSQSN 8 NT+F Q+N Sbjct: 404 NTSFIQNN 411>NP_001135440 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NTAFSQSN 8 NT+F Q+N Sbjct: 370 NTSFIQNN 377Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.106 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,143 Number of extensions: 1061 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |