Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004295                                                              19     665
NP_066580                                                              18    1935
XP_005253535                                                           18    1935
XP_005253534                                                           18    1935
XP_005253531                                                           18    1935
NP_602307                                                              18    1935
NP_056385                                                              16    5631
NP_001120703                                                           16    5631
NP_872349                                                              16    5631
NP_001269285                                                           16    5631
NP_599028                                                              16    5631
NP_439897                                                              16    5631
XP_006717463                                                           16    5631
XP_005252456                                                           16    5631
XP_005252455                                                           16    5631
XP_005252454                                                           16    5631
XP_005252451                                                           16    5631
NP_038478                                                              16    7355
NP_001273762                                                           16    7355
NP_001269973                                                           16    7355
NP_001276904                                                           16    7355
NP_001128526                                                           16    7355
NP_001128525                                                           16    7355
NP_055805                                                              16    7355
NP_001269972                                                           16    7355
NP_068577                                                              16    7355
NP_000951                                                              16    7355
NP_919277                                                              16    7355
NP_005246                                                              16    7355
XP_005259152                                                           16    7355
XP_005259150                                                           16    7355
XP_005267555                                                           16    7355
XP_006720166                                                           16    7355
XP_005267550                                                           16    7355
XP_005267549                                                           16    7355
XP_005267548                                                           16    7355
XP_006720165                                                           16    7355
XP_006720164                                                           16    7355
XP_006720163                                                           16    7355
XP_006720162                                                           16    7355
XP_006720161                                                           16    7355
XP_005253105                                                           16    7355
XP_005253104                                                           16    7355
XP_005253102                                                           16    7355
XP_005253103                                                           16    7355
XP_005253101                                                           16    7355
XP_005272330                                                           16    7355
XP_005272329                                                           16    7355
XP_005272327                                                           16    7355
XP_006713937                                                           16    7355
XP_005272326                                                           16    7355
XP_005272325                                                           16    7355
XP_006712537                                                           16    7355
XP_006712536                                                           16    7355
XP_005246557                                                           16    7355
XP_006712535                                                           16    7355
XP_006712534                                                           16    7355
XP_006712533                                                           16    7355
XP_006712532                                                           16    7355
XP_006712531                                                           16    7355
XP_006712530                                                           16    7355
XP_006712529                                                           16    7355
XP_006712528                                                           16    7355
XP_006712527                                                           16    7355
XP_005246549                                                           16    7355
XP_006712526                                                           16    7355
XP_006712525                                                           16    7355
XP_005246546                                                           16    7355
XP_006712524                                                           16    7355
XP_005246545                                                           16    7355
NP_001128715                                                           15    9605
NP_001128717                                                           15    9605
NP_001128716                                                           15    9605
NP_001008657                                                           15    9605
NP_000347                                                              15    9605
NP_001182070                                                           15    9605
NP_899068                                                              15    9605
NP_055240                                                              15    9605
XP_005251981                                                           15    9605
XP_005251980                                                           15    9605
XP_005268566                                                           15    9605
XP_005268565                                                           15    9605
XP_005268564                                                           15    9605
XP_005268563                                                           15    9605
XP_005268562                                                           15    9605
XP_005268561                                                           15    9605
XP_005268560                                                           15    9605
XP_005268559                                                           15    9605
NP_001002918                                                           15    9605
>NP_004295
          Length = 1620

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   NSSVLGLN 8
           NSSVLGLN
Sbjct: 864 NSSVLGLN 871
>NP_066580
          Length = 670

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   NSSVLGLNS 9
           NSSV+G+N+
Sbjct: 412 NSSVVGINT 420
>XP_005253535
          Length = 579

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   NSSVLGLNS 9
           NSSV+G+N+
Sbjct: 410 NSSVVGINT 418
>XP_005253534
          Length = 650

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   NSSVLGLNS 9
           NSSV+G+N+
Sbjct: 392 NSSVVGINT 400
>XP_005253531
          Length = 670

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   NSSVLGLNS 9
           NSSV+G+N+
Sbjct: 412 NSSVVGINT 420
>NP_602307
          Length = 670

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   NSSVLGLNS 9
           NSSV+G+N+
Sbjct: 412 NSSVVGINT 420
>NP_056385
          Length = 1259

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   NSSVLGLNS 9
           NSS L LNS
Sbjct: 395 NSSSLSLNS 403
>NP_001120703
          Length = 1235

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   NSSVLGLNS 9
           NSS L LNS
Sbjct: 395 NSSSLSLNS 403
>NP_872349
          Length = 469

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NSSVLGLNS 9
           N+ +LGLNS
Sbjct: 278 NALLLGLNS 286
>NP_001269285
          Length = 656

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   NSSVLGLN 8
           N+SVLGL+
Sbjct: 131 NTSVLGLS 138
>NP_599028
          Length = 663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   NSSVLGLN 8
           N+SVLGL+
Sbjct: 131 NTSVLGLS 138
>NP_439897
          Length = 656

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   NSSVLGLN 8
           N+SVLGL+
Sbjct: 131 NTSVLGLS 138
>XP_006717463
          Length = 328

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NSSVLGLNS 9
           N+ +LGLNS
Sbjct: 137 NALLLGLNS 145
>XP_005252456
          Length = 328

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NSSVLGLNS 9
           N+ +LGLNS
Sbjct: 137 NALLLGLNS 145
>XP_005252455
          Length = 370

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NSSVLGLNS 9
           N+ +LGLNS
Sbjct: 179 NALLLGLNS 187
>XP_005252454
          Length = 417

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NSSVLGLNS 9
           N+ +LGLNS
Sbjct: 226 NALLLGLNS 234
>XP_005252451
          Length = 468

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NSSVLGLNS 9
           N+ +LGLNS
Sbjct: 277 NALLLGLNS 285
>NP_038478
          Length = 2168

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>NP_001273762
          Length = 1213

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 626 NSSMRGLN 633
>NP_001269973
          Length = 2083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1817 SILGMNS 1823
>NP_001276904
          Length = 2132

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 177 SSVIGINT 184
>NP_001128526
          Length = 410

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>NP_001128525
          Length = 410

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>NP_055805
          Length = 2036

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1770 SILGMNS 1776
>NP_001269972
          Length = 2049

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1783 SILGMNS 1789
>NP_068577
          Length = 410

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>NP_000951
          Length = 386

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  NSSVLGL 7
          NSS+LGL
Sbjct: 78 NSSLLGL 84
>NP_919277
          Length = 2083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1770 SILGMNS 1776
>NP_005246
          Length = 1311

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 724 NSSMRGLN 731
>XP_005259152
          Length = 257

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  NSSVLGL 7
          NSS+LGL
Sbjct: 78 NSSLLGL 84
>XP_005259150
          Length = 342

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  NSSVLGL 7
          NSS+LGL
Sbjct: 78 NSSLLGL 84
>XP_005267555
          Length = 1325

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1011 SILGMNS 1017
>XP_006720166
          Length = 2083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1817 SILGMNS 1823
>XP_005267550
          Length = 2084

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1770 SILGMNS 1776
>XP_005267549
          Length = 2130

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1817 SILGMNS 1823
>XP_005267548
          Length = 2131

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 1817 SILGMNS 1823
>XP_006720165
          Length = 2542

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 2276 SILGMNS 2282
>XP_006720164
          Length = 2542

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 2276 SILGMNS 2282
>XP_006720163
          Length = 2543

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 2229 SILGMNS 2235
>XP_006720162
          Length = 2589

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 2276 SILGMNS 2282
>XP_006720161
          Length = 2590

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SVLGLNS 9
            S+LG+NS
Sbjct: 2276 SILGMNS 2282
>XP_005253105
          Length = 424

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 25 SSVLGVN 31
>XP_005253104
          Length = 479

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>XP_005253102
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>XP_005253103
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>XP_005253101
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  SSVLGLN 8
          SSVLG+N
Sbjct: 80 SSVLGVN 86
>XP_005272330
          Length = 1140

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 724 NSSMRGLN 731
>XP_005272329
          Length = 1175

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 588 NSSMRGLN 595
>XP_005272327
          Length = 1236

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 724 NSSMRGLN 731
>XP_006713937
          Length = 1249

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 662 NSSMRGLN 669
>XP_005272326
          Length = 1262

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 724 NSSMRGLN 731
>XP_005272325
          Length = 1300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NSSVLGLN 8
           NSS+ GLN
Sbjct: 724 NSSMRGLN 731
>XP_006712537
          Length = 1952

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_006712536
          Length = 2082

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_005246557
          Length = 2095

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SSVLGLNS 9
          SSV+G+N+
Sbjct: 60 SSVIGINT 67
>XP_006712535
          Length = 2095

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SSVLGLNS 9
          SSV+G+N+
Sbjct: 60 SSVIGINT 67
>XP_006712534
          Length = 2114

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 177 SSVIGINT 184
>XP_006712533
          Length = 2116

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_006712532
          Length = 2141

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 177 SSVIGINT 184
>XP_006712531
          Length = 2169

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_006712530
          Length = 2176

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 177 SSVIGINT 184
>XP_006712529
          Length = 2179

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_006712528
          Length = 2180

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_006712527
          Length = 2203

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_005246549
          Length = 2212

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 177 SSVIGINT 184
>XP_006712526
          Length = 2212

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 177 SSVIGINT 184
>XP_006712525
          Length = 2212

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_005246546
          Length = 2214

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_006712524
          Length = 2214

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>XP_005246545
          Length = 2214

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SSV+G+N+
Sbjct: 179 SSVIGINT 186
>NP_001128715
          Length = 1488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_001128717
          Length = 1412

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_001128716
          Length = 1451

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_001008657
          Length = 958

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_000347
          Length = 1411

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_001182070
          Length = 1450

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_899068
          Length = 895

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   SSVLGLNS 9
           SSVL LNS
Sbjct: 853 SSVLRLNS 860
>NP_055240
          Length = 1065

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVLGLNS 9
            SSVL LNS
Sbjct: 1023 SSVLRLNS 1030
>XP_005251981
          Length = 988

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   SSVLGLNS 9
           SSVL LNS
Sbjct: 927 SSVLRLNS 934
>XP_005251980
          Length = 1084

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVLGLNS 9
            SSVL LNS
Sbjct: 1023 SSVLRLNS 1030
>XP_005268566
          Length = 994

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268565
          Length = 995

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268564
          Length = 1449

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268563
          Length = 1488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268562
          Length = 1489

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268561
          Length = 1525

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268560
          Length = 1525

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>XP_005268559
          Length = 1526

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   NSSVLG 6
           NSSVLG
Sbjct: 109 NSSVLG 114
>NP_001002918
          Length = 311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVLGLNS 9
           SS+LG++S
Sbjct: 223 SSILGIHS 230
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.295    0.116    0.279 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 459,567
Number of extensions: 738
Number of successful extensions: 89
Number of sequences better than 10000.0: 89
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 89
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package