Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002515 20 299 NP_789765 17 4312 NP_001123914 17 4312 NP_005334 17 4312 NP_004976 17 4312 NP_203524 17 4312 NP_001230814 17 4312 NP_001230806 17 4312 NP_005740 17 4312 NP_060646 17 4312 XP_006725199 17 4312 XP_006719132 17 4312 XP_006718280 17 4312 NP_001258754 16 5631 NP_109591 16 5631 NP_001258753 16 5631 NP_004559 16 5631 NP_001182220 16 5631 NP_001258752 16 5631 NP_001258751 16 5631 NP_004146 16 5631 XP_005249241 16 5631 XP_005249240 16 5631 XP_006715176 16 5631 XP_006715175 16 5631 XP_005249238 16 5631 XP_006715071 16 5631 XP_005264132 16 5631 NP_056988 16 5631 NP_003931 16 7355 NP_149037 16 7355 NP_001182163 16 7355 NP_001098992 16 7355 NP_001193556 16 7355 NP_065091 16 7355 NP_001193555 16 7355 NP_001171700 16 7355 XP_006710017 16 7355 XP_006710016 16 7355 XP_005275771 16 7355 XP_005275770 16 7355 NP_001053 16 7355 NP_003115 15 9605 NP_110388 15 9605 NP_003030 15 9605 NP_001578 15 9605 NP_000267 15 9605 NP_005497 15 9605 NP_001191184 15 9605 NP_997303 15 9605 NP_005015 15 9605 XP_005262479 15 9605 XP_005262478 15 9605 XP_006724824 15 9605 XP_006724823 15 9605 XP_006710899 15 9605 XP_005263548 15 9605 XP_005245954 15 9605>NP_002515 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 NSKSF DIN Sbjct: 86 NSKSFADIN 94>NP_789765 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>NP_001123914 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>NP_005334 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>NP_004976 Length = 188 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>NP_203524 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>NP_001230814 Length = 206 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NSKSFVD 7 N KSFVD Sbjct: 178 NEKSFVD 184>NP_001230806 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NSKSFVD 7 N KSFVD Sbjct: 317 NEKSFVD 323>NP_005740 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NSKSFVD 7 N KSFVD Sbjct: 317 NEKSFVD 323>NP_060646 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NSKSFVDI 8 NSK FV+I Sbjct: 449 NSKQFVEI 456>XP_006725199 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>XP_006719132 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>XP_006718280 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 N+KSF DI+ Sbjct: 86 NTKSFEDIH 94>NP_001258754 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 318 KSFVEVN 324>NP_109591 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 321 KSFVEVN 327>NP_001258753 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 318 KSFVEVN 324>NP_004559 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 318 KSFVEVN 324>NP_001182220 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 322 KSFVEVN 328>NP_001258752 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 337 KSFVEVN 343>NP_001258751 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 332 KSFVEVN 338>NP_004146 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 317 KSFVEVN 323>XP_005249241 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 317 KSFVEVN 323>XP_005249240 Length = 287 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 229 KSFVEVN 235>XP_006715176 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 322 KSFVEVN 328>XP_006715175 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 322 KSFVEVN 328>XP_005249238 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 351 KSFVEVN 357>XP_006715071 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 KSFV++N Sbjct: 321 KSFVEVN 327>XP_005264132 Length = 1219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SKSFVDI 8 SK+FVDI Sbjct: 1128 SKNFVDI 1134>NP_056988 Length = 1220 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SKSFVDI 8 SK+FVDI Sbjct: 1129 SKNFVDI 1135>NP_003931 Length = 863 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSKSFVDIN 9 NSK F+D++ Sbjct: 113 NSKIFLDLD 121>NP_149037 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NSKSFVDI 8 N K FVDI Sbjct: 249 NIKGFVDI 256>NP_001182163 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>NP_001098992 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>NP_001193556 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>NP_065091 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>NP_001193555 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>NP_001171700 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NSKSFVDI 8 N K FVDI Sbjct: 249 NIKGFVDI 256>XP_006710017 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 344 SFVDVN 349>XP_006710016 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>XP_005275771 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 344 SFVDVN 349>XP_005275770 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFVDIN 9 SFVD+N Sbjct: 421 SFVDVN 426>NP_001053 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 K+F+DIN Sbjct: 297 KTFLDIN 303>NP_003115 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKSFVDIN 9 SK FVD++ Sbjct: 108 SKGFVDLS 115>NP_110388 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKSFVDI 8 S+SFVD+ Sbjct: 166 SQSFVDV 172>NP_003030 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SKSFVDIN 9 +K+F++IN Sbjct: 465 AKTFIEIN 472>NP_001578 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSFVDIN 9 K+FVD N Sbjct: 461 KAFVDFN 467>NP_000267 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSFVDIN 9 K+FVD N Sbjct: 461 KAFVDFN 467>NP_005497 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 ++FVDIN Sbjct: 364 ETFVDIN 370>NP_001191184 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 ++FVDIN Sbjct: 221 ETFVDIN 227>NP_997303 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 K+FV+IN Sbjct: 472 KTFVEIN 478>NP_005015 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSFVDIN 9 K+FV+IN Sbjct: 339 KAFVEIN 345>XP_005262479 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSFVDIN 9 K+FVD N Sbjct: 304 KAFVDFN 310>XP_005262478 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSFVDIN 9 K+FVD N Sbjct: 395 KAFVDFN 401>XP_006724824 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSFVDIN 9 K+FVD N Sbjct: 458 KAFVDFN 464>XP_006724823 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSFVDIN 9 K+FVD N Sbjct: 458 KAFVDFN 464>XP_006710899 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SKSFVDIN 9 +K+F++IN Sbjct: 455 AKTFIEIN 462>XP_005263548 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SKSFVDIN 9 +K+F++IN Sbjct: 465 AKTFIEIN 472>XP_005245954 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKSFVDI 8 S+SFVD+ Sbjct: 111 SQSFVDV 117Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.125 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 430,934 Number of extensions: 889 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |