Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 19 665 NP_001087241 19 665 XP_006714101 19 665 XP_005265799 19 665 XP_005265798 19 665 XP_005265797 19 665 NP_001028198 16 5631 NP_219488 16 5631 NP_006314 16 5631 NP_001036199 16 5631 XP_005259735 16 5631 XP_005259733 16 5631 XP_005259732 16 5631 XP_005262748 16 5631 XP_005262746 16 5631 XP_005262745 16 5631 NP_005273 16 5631 NP_115783 16 5631 NP_061752 16 5631 NP_001139317 16 7355 NP_598334 16 7355 NP_002932 16 7355 NP_001239268 16 7355 NP_001239267 16 7355 NP_001785 16 7355 NP_001276968 16 7355 NP_001276969 16 7355 NP_001122401 16 7355 NP_002010 16 7355 NP_001153392 16 7355 NP_002933 16 7355 NP_001153503 16 7355 NP_001153502 16 7355 NP_071765 16 7355 XP_006713342 16 7355 XP_006713341 16 7355 XP_006713340 16 7355 XP_006713339 16 7355 NP_039225 15 9605 NP_115604 15 9605 NP_851322 15 9605 XP_005275582 15 9605 XP_005275581 15 9605 XP_005275423 15 9605 XP_005275422 15 9605 XP_005275288 15 9605 XP_005275287 15 9605 XP_005275147 15 9605 XP_005275146 15 9605 XP_005274992 15 9605 XP_005274991 15 9605 XP_005272846 15 9605 XP_005272845 15 9605 XP_005274901 15 9605 XP_005274900 15 9605 XP_005249059 15 9605 XP_005249058 15 9605 XP_005265887 15 9605 NP_004937 15 9605>NP_000213 Length = 976 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 NSIYVFV D Sbjct: 105 NSIYVFVRD 113>NP_001087241 Length = 972 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 NSIYVFV D Sbjct: 105 NSIYVFVRD 113>XP_006714101 Length = 526 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 NSIYVFV D Sbjct: 105 NSIYVFVRD 113>XP_005265799 Length = 973 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 NSIYVFV D Sbjct: 105 NSIYVFVRD 113>XP_005265798 Length = 976 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 NSIYVFV D Sbjct: 105 NSIYVFVRD 113>XP_005265797 Length = 977 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 NSIYVFV D Sbjct: 105 NSIYVFVRD 113>NP_001028198 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 + I+VF++D Sbjct: 327 HQIFVFIVD 335>NP_219488 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 + I+VF++D Sbjct: 327 HQIFVFIVD 335>NP_006314 Length = 1268 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 ++Y+FV+D Sbjct: 678 AVYLFVLD 685>NP_001036199 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 ++Y+FV+D Sbjct: 643 AVYLFVLD 650>XP_005259735 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 + I+VF++D Sbjct: 333 HQIFVFIVD 341>XP_005259733 Length = 655 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 + I+VF++D Sbjct: 327 HQIFVFIVD 335>XP_005259732 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 + I+VF++D Sbjct: 333 HQIFVFIVD 341>XP_005262748 Length = 1263 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 ++Y+FV+D Sbjct: 673 AVYLFVLD 680>XP_005262746 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 ++Y+FV+D Sbjct: 708 AVYLFVLD 715>XP_005262745 Length = 1299 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 ++Y+FV+D Sbjct: 709 AVYLFVLD 716>NP_005273 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 S+Y+FVI Sbjct: 22 SLYIFVI 28>NP_115783 Length = 878 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 S++VFV+D Sbjct: 549 SLHVFVLD 556>NP_061752 Length = 944 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SIYVFVID 9 S++VFV+D Sbjct: 549 SLHVFVLD 556>NP_001139317 Length = 1551 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 591 NAIYLFLV 598>NP_598334 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 591 NAIYLFLV 598>NP_002932 Length = 1651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 627 NAIYLFLV 634>NP_001239268 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IYVFVID 9 +Y++VID Sbjct: 189 LYIYVID 195>NP_001239267 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IYVFVID 9 +Y++VID Sbjct: 226 LYIYVID 232>NP_001785 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IYVFVID 9 +Y++VID Sbjct: 263 LYIYVID 269>NP_001276968 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 592 NTIYLFMV 599>NP_001276969 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 592 NTIYLFMV 599>NP_001122401 Length = 1394 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 604 NTIYLFMV 611>NP_002010 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 ++IY+F+ D Sbjct: 122 SAIYIFISD 130>NP_001153392 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 ++IY+F+ D Sbjct: 122 SAIYIFISD 130>NP_002933 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 588 NTIYLFMV 595>NP_001153503 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 ++IY+F+ D Sbjct: 122 SAIYIFISD 130>NP_001153502 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NSIYVFVID 9 ++IY+F+ D Sbjct: 122 SAIYIFISD 130>NP_071765 Length = 1386 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 622 NTIYLFLV 629>XP_006713342 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 608 NTIYLFMV 615>XP_006713341 Length = 1600 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 576 NAIYLFLV 583>XP_006713340 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 591 NAIYLFLV 598>XP_006713339 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSIYVFVI 8 N+IY+F++ Sbjct: 592 NAIYLFLV 599>NP_039225 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>NP_115604 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NSIYVFV 7 NS+YV V Sbjct: 38 NSVYVLV 44>NP_851322 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NSIYVFVI 8 N +YVF++ Sbjct: 227 NYLYVFIL 234>XP_005275582 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275581 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275423 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275422 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275288 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275287 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275147 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275146 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274992 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274991 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005272846 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005272845 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274901 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274900 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005249059 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005249058 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIYVFVI 8 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005265887 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NSIYVFV 7 +S+YVFV Sbjct: 221 HSLYVFV 227>NP_004937 Length = 1830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NSIYVFV 7 +S+YVFV Sbjct: 221 HSLYVFV 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.153 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 394,918 Number of extensions: 841 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |