Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 390 XP_005251512 20 390 NP_006071 18 1482 XP_006715902 18 1482 XP_006715901 18 1482 XP_005250168 18 1482 XP_005250167 18 1482 NP_001269158 17 4312 NP_001269155 17 4312 NP_001269156 17 4312 NP_803124 17 4312 NP_001269154 17 4312 NP_001269157 17 4312 NP_073622 17 4312 NP_057345 17 4312 NP_001180542 17 4312 NP_001180539 17 4312 XP_006724360 17 4312 XP_005261762 17 4312 XP_005261761 17 4312 XP_006724143 17 4312 XP_005257484 17 4312 XP_005257483 17 4312 XP_005257482 17 4312 NP_942153 17 4312 NP_443132 16 5631 NP_937757 16 5631 NP_937756 16 5631 NP_036320 16 7355 NP_658982 16 7355 NP_001243549 16 7355 XP_006717832 16 7355 XP_006717831 16 7355 NP_612478 16 7355 NP_055287 16 7355 NP_001243548 16 7355 NP_001002907 16 7355 NP_006036 15 9605 NP_001036171 15 9605 NP_001036170 15 9605 NP_001007528 15 9605 NP_001184043 15 9605 NP_001184042 15 9605 NP_001184029 15 9605>NP_004963 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NSISY TFL Sbjct: 202 NSISYKTFL 210>XP_005251512 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NSISY TFL Sbjct: 202 NSISYKTFL 210>NP_006071 Length = 771 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NS SY+TFL Sbjct: 53 NSSSYHTFL 61>XP_006715902 Length = 771 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NS SY+TFL Sbjct: 53 NSSSYHTFL 61>XP_006715901 Length = 771 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NS SY+TFL Sbjct: 53 NSSSYHTFL 61>XP_005250168 Length = 771 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NS SY+TFL Sbjct: 53 NSSSYHTFL 61>XP_005250167 Length = 771 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSISYNTFL 9 NS SY+TFL Sbjct: 53 NSSSYHTFL 61>NP_001269158 Length = 391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 358 NSIKYSTLL 366>NP_001269155 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 478 NSIKYSTLL 486>NP_001269156 Length = 469 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 436 NSIKYSTLL 444>NP_803124 Length = 270 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 237 NSIKYSTLL 245>NP_001269154 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 478 NSIKYSTLL 486>NP_001269157 Length = 469 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 436 NSIKYSTLL 444>NP_073622 Length = 1501 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 + ISYN FL Sbjct: 1488 SKISYNDFL 1496>NP_057345 Length = 453 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 NS++Y TF Sbjct: 283 NSLAYTTF 290>NP_001180542 Length = 237 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 NS++Y TF Sbjct: 67 NSLAYTTF 74>NP_001180539 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 NS++Y TF Sbjct: 283 NSLAYTTF 290>XP_006724360 Length = 885 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 + ISYN FL Sbjct: 872 SKISYNDFL 880>XP_005261762 Length = 1481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 + ISYN FL Sbjct: 1468 SKISYNDFL 1476>XP_005261761 Length = 1587 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 + ISYN FL Sbjct: 1574 SKISYNDFL 1582>XP_006724143 Length = 283 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 NSI Y+T L Sbjct: 250 NSIKYSTLL 258>XP_005257484 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 NS++Y TF Sbjct: 126 NSLAYTTF 133>XP_005257483 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 NS++Y TF Sbjct: 126 NSLAYTTF 133>XP_005257482 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 NS++Y TF Sbjct: 216 NSLAYTTF 223>NP_942153 Length = 1349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 + ISYN FL Sbjct: 1336 SKISYNDFL 1344>NP_443132 Length = 3538 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SISYNTF 8 +I+YNTF Sbjct: 719 NITYNTF 725>NP_937757 Length = 3667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SISYNTF 8 +I+YNTF Sbjct: 783 NITYNTF 789>NP_937756 Length = 3707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SISYNTF 8 +I+YNTF Sbjct: 823 NITYNTF 829>NP_036320 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSISYNTF 8 NS+++N+F Sbjct: 315 NSLTFNSF 322>NP_658982 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NSISYNTF 8 NS+++N+F Sbjct: 220 NSLTFNSF 227>NP_001243549 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SYNTFL 9 +YNTFL Sbjct: 482 NYNTFL 487>XP_006717832 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SYNTFL 9 +YNTFL Sbjct: 482 NYNTFL 487>XP_006717831 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SYNTFL 9 +YNTFL Sbjct: 482 NYNTFL 487>NP_612478 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SYNTFL 9 +YNTFL Sbjct: 482 NYNTFL 487>NP_055287 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SYNTFL 9 +YNTFL Sbjct: 482 NYNTFL 487>NP_001243548 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SYNTFL 9 +YNTFL Sbjct: 482 NYNTFL 487>NP_001002907 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 N+ISYN + Sbjct: 96 NTISYNWY 103>NP_006036 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISYNTFL 9 +SY TFL Sbjct: 919 LSYKTFL 925>NP_001036171 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 +S+S NTF Sbjct: 84 SSVSMNTF 91>NP_001036170 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 +S+S NTF Sbjct: 84 SSVSMNTF 91>NP_001007528 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NSISYNTFL 9 N+I Y T+L Sbjct: 151 NAIYYGTYL 159>NP_001184043 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 +S+S NTF Sbjct: 57 SSVSMNTF 64>NP_001184042 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 +S+S NTF Sbjct: 84 SSVSMNTF 91>NP_001184029 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSISYNTF 8 +S+S NTF Sbjct: 57 SSVSMNTF 64Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.129 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,549 Number of extensions: 750 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |