Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 21 229 NP_001263689 21 229 NP_001119584 21 229 NP_001119586 21 229 NP_001263625 21 229 NP_001119590 21 229 NP_001263690 21 229 NP_001119585 21 229 NP_001263624 21 229 NP_001119588 21 229 NP_001119587 21 229 NP_001119589 21 229 NP_001263627 21 229 NP_001263628 21 229 NP_001263626 21 229 NP_001273497 17 3301 NP_115519 17 3301 NP_001273498 17 3301 XP_005263869 17 3301 XP_005263868 17 3301 XP_006712851 17 3301 XP_005263866 17 3301 NP_001231509 16 5631 NP_003487 16 5631 NP_001191121 16 5631 NP_001001481 16 5631 NP_001119713 16 5631 NP_001191117 16 5631 NP_001119712 16 5631 NP_001119714 16 5631 NP_060769 16 5631 NP_005418 16 5631 NP_001191116 16 5631 NP_001191115 16 5631 NP_001191119 16 5631 NP_001191113 16 5631 NP_001191118 16 5631 NP_001191120 16 5631 NP_001191114 16 5631 NP_001257944 16 5631 NP_001108451 16 7355 NP_001108454 16 7355 NP_003713 16 7355 NP_001108450 16 7355 NP_001108452 16 7355 NP_001108453 16 7355 NP_036471 16 7355 XP_005269724 16 7355 XP_005247903 16 7355 XP_005247901 16 7355 XP_005247900 16 7355 NP_001005284 16 7355 NP_004179 15 9605 NP_001128503 15 9605 NP_055826 15 9605 NP_001185879 15 9605 NP_443182 15 9605 NP_001243196 15 9605 NP_005920 15 9605 NP_115967 15 9605 NP_001004733 15 9605 NP_001240841 15 9605 NP_055988 15 9605 NP_001348 15 9605 NP_001265603 15 9605 NP_201573 15 9605 XP_006718107 15 9605 XP_006718106 15 9605 XP_006717361 15 9605 XP_006717360 15 9605 XP_005262708 15 9605 XP_005262706 15 9605 XP_006714063 15 9605 XP_005262705 15 9605 XP_006714062 15 9605 XP_005262704 15 9605 XP_005262703 15 9605 XP_006713707 15 9605 XP_006713706 15 9605 XP_006713705 15 9605>NP_000537 Length = 393 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 268 NSFEVRVCA 276>NP_001263689 Length = 354 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 229 NSFEVRVCA 237>NP_001119584 Length = 393 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 268 NSFEVRVCA 276>NP_001119586 Length = 341 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 268 NSFEVRVCA 276>NP_001263625 Length = 302 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 229 NSFEVRVCA 237>NP_001119590 Length = 354 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 229 NSFEVRVCA 237>NP_001263690 Length = 354 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 229 NSFEVRVCA 237>NP_001119585 Length = 346 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 268 NSFEVRVCA 276>NP_001263624 Length = 307 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 229 NSFEVRVCA 237>NP_001119588 Length = 209 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 136 NSFEVRVCA 144>NP_001119587 Length = 261 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 136 NSFEVRVCA 144>NP_001119589 Length = 214 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 136 NSFEVRVCA 144>NP_001263627 Length = 182 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 109 NSFEVRVCA 117>NP_001263628 Length = 187 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 109 NSFEVRVCA 117>NP_001263626 Length = 234 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NSFEVR CA Sbjct: 109 NSFEVRVCA 117>NP_001273497 Length = 1077 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 927 NSWDSRFCS 935>NP_115519 Length = 1079 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 929 NSWDSRFCS 937>NP_001273498 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 475 NSWDSRFCS 483>XP_005263869 Length = 1019 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 869 NSWDSRFCS 877>XP_005263868 Length = 1019 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 869 NSWDSRFCS 877>XP_006712851 Length = 1079 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 929 NSWDSRFCS 937>XP_005263866 Length = 1079 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 NS++ RFC+ Sbjct: 929 NSWDSRFCS 937>NP_001231509 Length = 3859 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 NSF +FC Sbjct: 1457 NSFNDKFC 1464>NP_003487 Length = 3830 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 NSF +FC Sbjct: 1457 NSFNDKFC 1464>NP_001191121 Length = 565 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 218 SFEGRICA 225>NP_001001481 Length = 191 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 NSF VR C Sbjct: 168 NSFYVRTC 175>NP_001119713 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 240 SFEGRICA 247>NP_001191117 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 289 SFEGRICA 296>NP_001119712 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 240 SFEGRICA 247>NP_001119714 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 240 SFEGRICA 247>NP_060769 Length = 180 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 NSF VR C Sbjct: 157 NSFYVRTC 164>NP_005418 Length = 636 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 289 SFEGRICA 296>NP_001191116 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 289 SFEGRICA 296>NP_001191115 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 289 SFEGRICA 296>NP_001191119 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 240 SFEGRICA 247>NP_001191113 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 289 SFEGRICA 296>NP_001191118 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 240 SFEGRICA 247>NP_001191120 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 240 SFEGRICA 247>NP_001191114 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFEVRFCA 9 SFE R CA Sbjct: 289 SFEGRICA 296>NP_001257944 Length = 188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 NSF VR C Sbjct: 157 NSFYVRTC 164>NP_001108451 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 340 FEARICA 346>NP_001108454 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 246 FEARICA 252>NP_003713 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 340 FEARICA 346>NP_001108450 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 340 FEARICA 346>NP_001108452 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 246 FEARICA 252>NP_001108453 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 246 FEARICA 252>NP_036471 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 +S +VR+CA Sbjct: 5 DSEQVRYCA 13>XP_005269724 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSFEVRFCA 9 +S +VR+CA Sbjct: 5 DSEQVRYCA 13>XP_005247903 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 340 FEARICA 346>XP_005247901 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 323 FEARICA 329>XP_005247900 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FEVRFCA 9 FE R CA Sbjct: 340 FEARICA 346>NP_001005284 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 N+F + FC Sbjct: 177 NTFRLHFC 184>NP_004179 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE R C Sbjct: 219 SFECRMC 225>NP_001128503 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE R C Sbjct: 173 SFECRMC 179>NP_055826 Length = 1858 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FEVRFC 8 FE++FC Sbjct: 557 FELQFC 562>NP_001185879 Length = 1880 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FEVRFC 8 FE++FC Sbjct: 579 FELQFC 584>NP_443182 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEVR C Sbjct: 339 FEVRVC 344>NP_001243196 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE FC Sbjct: 112 SFEPNFC 118>NP_005920 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVRFCA 9 EVR+CA Sbjct: 22 EVRWCA 27>NP_115967 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE FC Sbjct: 112 SFEPNFC 118>NP_001004733 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NSFEVRFC 8 N+F + FC Sbjct: 160 NTFRLSFC 167>NP_001240841 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>NP_055988 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>NP_001348 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 4 EVRFC 8 E+RFC Sbjct: 936 EIRFC 940>NP_001265603 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 NSFEVRFC 8 N F RFC Sbjct: 173 NGFMSRFC 180>NP_201573 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVRFCA 9 EVR+CA Sbjct: 22 EVRWCA 27>XP_006718107 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE FC Sbjct: 112 SFEPNFC 118>XP_006718106 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE FC Sbjct: 112 SFEPNFC 118>XP_006717361 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE R C Sbjct: 241 SFECRMC 247>XP_006717360 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 SFEVRFC 8 SFE R C Sbjct: 241 SFECRMC 247>XP_005262708 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 44 FEVLFC 49>XP_005262706 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 44 FEVLFC 49>XP_006714063 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>XP_005262705 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>XP_006714062 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>XP_005262704 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>XP_005262703 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FEVRFC 8 FEV FC Sbjct: 173 FEVLFC 178>XP_006713707 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVRFCA 9 EVR+CA Sbjct: 22 EVRWCA 27>XP_006713706 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVRFCA 9 EVR+CA Sbjct: 22 EVRWCA 27>XP_006713705 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVRFCA 9 EVR+CA Sbjct: 22 EVRWCA 27Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.139 0.469 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 512,341 Number of extensions: 1006 Number of successful extensions: 80 Number of sequences better than 10000.0: 80 Number of HSP's gapped: 80 Number of HSP's successfully gapped: 80 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |