Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_001029 17 4312 NP_001153048 17 4312 NP_001153047 17 4312 NP_115272 17 4312 NP_061750 17 4312 NP_001167594 17 4312 XP_006722587 17 4312 NP_000825 16 5631 NP_997320 16 5631 NP_055203 16 5631 NP_061759 16 5631 XP_005253612 16 5631 XP_006711338 16 5631 NP_001968 16 5631 NP_003845 16 7355 NP_055507 16 7355 NP_006085 16 7355 NP_653226 16 7355 NP_001157743 16 7355 NP_872584 16 7355 NP_057278 16 7355 NP_001123481 16 7355 NP_055640 16 7355 NP_006569 16 7355 NP_872431 16 7355 NP_061757 16 7355 XP_005273432 16 7355 XP_005273431 16 7355 XP_006712885 16 7355 XP_006712884 16 7355 XP_006712883 16 7355 XP_005264093 16 7355 XP_005264092 16 7355 XP_006712069 16 7355 XP_006712068 16 7355 XP_005262670 16 7355 XP_006711799 16 7355 NP_001001874 15 9605 NP_001165783 15 9605 NP_061992 15 9605 NP_002661 15 9605 NP_001138791 15 9605 NP_001269266 15 9605 NP_001269267 15 9605 NP_001165806 15 9605 NP_001129497 15 9605 NP_005023 15 9605 XP_006713725 15 9605 XP_006713724 15 9605 XP_006713723 15 9605 NP_061753 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 2435 NRYTVKVQR 2443>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 1087 NRYTVKVQR 1095>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 2087 NRYTVKVQR 2095>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 2429 NRYTVKVQR 2437>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 2435 NRYTVKVQR 2443>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 2435 NRYTVKVQR 2443>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRYTVNVQR 9 NRYTV VQR Sbjct: 2435 NRYTVKVQR 2443>NP_001029 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRYTVNVQR 9 N YTVN +R Sbjct: 510 NNYTVNNKR 518>NP_001153048 Length = 728 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRYTVNVQR 9 N YTVN +R Sbjct: 569 NNYTVNNKR 577>NP_001153047 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRYTVNVQR 9 N YTVN +R Sbjct: 533 NNYTVNNKR 541>NP_115272 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RYTVNVQ 8 RYT+N++ Sbjct: 314 RYTINIE 320>NP_061750 Length = 929 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RYTVNVQ 8 RYT+N++ Sbjct: 314 RYTINIE 320>NP_001167594 Length = 685 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NRYTVNVQ 8 NRY+ N+Q Sbjct: 489 NRYSSNIQ 496>XP_006722587 Length = 685 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NRYTVNVQ 8 NRY+ N+Q Sbjct: 489 NRYSSNIQ 496>NP_000825 Length = 1484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 NRY +NV Sbjct: 336 NRYLINV 342>NP_997320 Length = 4471 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RYTVNVQR 9 RYT +QR Sbjct: 703 RYTAGIQR 710>NP_055203 Length = 756 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NRYTVNVQ 8 N+Y VN+Q Sbjct: 547 NKYCVNMQ 554>NP_061759 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YTVNVQ 8 YTVN+Q Sbjct: 317 YTVNIQ 322>XP_005253612 Length = 4589 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RYTVNVQR 9 RYT +QR Sbjct: 821 RYTAGIQR 828>XP_006711338 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NRYTVNVQ 8 N+Y VN+Q Sbjct: 547 NKYCVNMQ 554>NP_001968 Length = 957 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRYTVN 6 NRYT+N Sbjct: 880 NRYTLN 885>NP_003845 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YTVN+ Sbjct: 294 NLYTVNI 300>NP_055507 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RYTVNVQR 9 +YT NV+R Sbjct: 151 QYTANVKR 158>NP_006085 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVNVQR 9 TVNVQR Sbjct: 644 TVNVQR 649>NP_653226 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRYTVN 6 NR+TVN Sbjct: 238 NRFTVN 243>NP_001157743 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVNVQR 9 TVNVQR Sbjct: 570 TVNVQR 575>NP_872584 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVNVQR 9 TVNVQR Sbjct: 1081 TVNVQR 1086>NP_057278 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YT+NV Sbjct: 345 NDYTINV 351>NP_001123481 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RYTVNVQR 9 RYT N+++ Sbjct: 638 RYTANIKK 645>NP_055640 Length = 2271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRYTVN 6 NR+TVN Sbjct: 1964 NRFTVN 1969>NP_006569 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YT+NV Sbjct: 303 NDYTINV 309>NP_872431 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RYTVNVQR 9 RYT N+++ Sbjct: 638 RYTANIKK 645>NP_061757 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YTVNVQ 8 YT+N+Q Sbjct: 315 YTINIQ 320>XP_005273432 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVNVQR 9 TVNVQR Sbjct: 678 TVNVQR 683>XP_005273431 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVNVQR 9 TVNVQR Sbjct: 1081 TVNVQR 1086>XP_006712885 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YTVN+ Sbjct: 143 NLYTVNI 149>XP_006712884 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YTVN+ Sbjct: 227 NLYTVNI 233>XP_006712883 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YTVN+ Sbjct: 228 NLYTVNI 234>XP_005264093 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YTVN+ Sbjct: 294 NLYTVNI 300>XP_005264092 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NRYTVNV 7 N YTVN+ Sbjct: 322 NLYTVNI 328>XP_006712069 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RYTVNVQR 9 RYT N+++ Sbjct: 638 RYTANIKK 645>XP_006712068 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RYTVNVQR 9 RYT N+++ Sbjct: 638 RYTANIKK 645>XP_005262670 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RYTVNVQR 9 RYT N+++ Sbjct: 638 RYTANIKK 645>XP_006711799 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRYTVN 6 NR+TVN Sbjct: 248 NRFTVN 253>NP_001001874 Length = 136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NRYTVNVQR 9 N+YT+N R Sbjct: 127 NKYTLNQGR 135>NP_001165783 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 502 RYTLNV 507>NP_061992 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NRYTVNVQ 8 N Y +N+Q Sbjct: 313 NSYKINIQ 320>NP_002661 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 502 RYTLNV 507>NP_001138791 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 502 RYTLNV 507>NP_001269266 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 491 RYTLNV 496>NP_001269267 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 459 RYTLNV 464>NP_001165806 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 477 RYTLNV 482>NP_001129497 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 504 RYTLNV 509>NP_005023 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 504 RYTLNV 509>XP_006713725 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 502 RYTLNV 507>XP_006713724 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 502 RYTLNV 507>XP_006713723 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RYTVNV 7 RYT+NV Sbjct: 502 RYTLNV 507>NP_061753 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NRYTVNVQ 8 N Y +N+Q Sbjct: 313 NSYKINIQ 320Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.129 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,087 Number of extensions: 579 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |