Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 19 869 NP_858045 19 869 NP_006525 19 869 NP_001167559 19 869 NP_000236 18 1482 NP_001120972 18 1482 XP_006716052 18 1482 XP_006716051 18 1482 NP_001035545 18 1482 NP_000266 17 4312 XP_005268316 17 4312 NP_056261 16 7355 NP_060082 16 7355 NP_055590 16 7355 NP_001007468 16 7355 NP_001245256 16 7355 NP_001245255 16 7355 NP_001245254 16 7355 XP_005261931 16 7355 XP_006724453 16 7355 XP_005261930 16 7355 XP_006724452 16 7355 XP_005261929 16 7355 XP_005261928 16 7355 XP_005261927 16 7355 XP_006724451 16 7355 XP_005261926 16 7355 XP_005261925 16 7355 XP_006719555 16 7355 XP_005253638 16 7355 XP_006719554 16 7355 XP_006711822 16 7355 XP_006711821 16 7355 NP_065077 15 9605 NP_001180217 15 9605 NP_036440 15 9605 NP_001451 15 9605 NP_115979 15 9605 NP_001005366 15 9605 NP_001243334 15 9605 NP_940931 15 9605 NP_001138525 15 9605 XP_006721944 15 9605 XP_006721943 15 9605 XP_006721942 15 9605 XP_005254018 15 9605 XP_005254013 15 9605 XP_005254012 15 9605 XP_005254011 15 9605 XP_006718544 15 9605 XP_006718543 15 9605 XP_006718542 15 9605 XP_006716813 15 9605 XP_005251482 15 9605 XP_005251483 15 9605 XP_005245096 15 9605>NP_001167558 Length = 1423 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 NR LLRNSL Sbjct: 1026 NRPLLRNSL 1034>NP_858045 Length = 1424 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 NR LLRNSL Sbjct: 1026 NRPLLRNSL 1034>NP_006525 Length = 1420 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 NR LLRNSL Sbjct: 1026 NRPLLRNSL 1034>NP_001167559 Length = 1415 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 NR LLRNSL Sbjct: 1021 NRPLLRNSL 1029>NP_000236 Length = 1390 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 NRSLLRNS 8 NR+LLRNS Sbjct: 399 NRTLLRNS 406>NP_001120972 Length = 1408 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 NRSLLRNS 8 NR+LLRNS Sbjct: 399 NRTLLRNS 406>XP_006716052 Length = 1409 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 NRSLLRNS 8 NR+LLRNS Sbjct: 418 NRTLLRNS 425>XP_006716051 Length = 1427 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 NRSLLRNS 8 NR+LLRNS Sbjct: 418 NRTLLRNS 425>NP_001035545 Length = 832 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 NR+LLRN L Sbjct: 528 NRALLRNDL 536>NP_000266 Length = 838 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 N LLRNSL Sbjct: 97 NTPLLRNSL 105>XP_005268316 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 N LLRNSL Sbjct: 97 NTPLLRNSL 105>NP_056261 Length = 2275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSLLRNSL 9 RSL RNS+ Sbjct: 998 RSLARNSI 1005>NP_060082 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLLRNS 8 RSLL+NS Sbjct: 689 RSLLKNS 695>NP_055590 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 649 NRQLLRGAL 657>NP_001007468 Length = 1242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 680 NRQLLRGAL 688>NP_001245256 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 598 NRQLLRGAL 606>NP_001245255 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 598 NRQLLRGAL 606>NP_001245254 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 625 NRQLLRGAL 633>XP_005261931 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 680 NRQLLRGAL 688>XP_006724453 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 598 NRQLLRGAL 606>XP_005261930 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 598 NRQLLRGAL 606>XP_006724452 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 598 NRQLLRGAL 606>XP_005261929 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 649 NRQLLRGAL 657>XP_005261928 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 656 NRQLLRGAL 664>XP_005261927 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 656 NRQLLRGAL 664>XP_006724451 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 680 NRQLLRGAL 688>XP_005261926 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 680 NRQLLRGAL 688>XP_005261925 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRSLLRNSL 9 NR LLR +L Sbjct: 680 NRQLLRGAL 688>XP_006719555 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLLRNS 8 RSLL+NS Sbjct: 451 RSLLKNS 457>XP_005253638 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLLRNS 8 RSLL+NS Sbjct: 451 RSLLKNS 457>XP_006719554 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLLRNS 8 RSLL+NS Sbjct: 612 RSLLKNS 618>XP_006711822 Length = 2266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSLLRNSL 9 RSL RNS+ Sbjct: 989 RSLARNSI 996>XP_006711821 Length = 2301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSLLRNSL 9 RSL RNS+ Sbjct: 1024 RSLARNSI 1031>NP_065077 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 + SL+RNS+ Sbjct: 338 HNSLMRNSI 346>NP_001180217 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 + SL+RNS+ Sbjct: 338 HNSLMRNSI 346>NP_036440 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1034 NRSKLRN 1040>NP_001451 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSLLRNSL 9 RS+LRN L Sbjct: 240 RSMLRNVL 247>NP_115979 Length = 1336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1208 NRSKLRN 1214>NP_001005366 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1139 NRSKLRN 1145>NP_001243334 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 595 NRSKLRN 601>NP_940931 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLLRN 7 RSLLRN Sbjct: 425 RSLLRN 430>NP_001138525 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLLRN 7 RSLLRN Sbjct: 369 RSLLRN 374>XP_006721944 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLLRN 7 RSLLRN Sbjct: 425 RSLLRN 430>XP_006721943 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLLRN 7 RSLLRN Sbjct: 425 RSLLRN 430>XP_006721942 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLLRN 7 RSLLRN Sbjct: 425 RSLLRN 430>XP_005254018 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 648 NRSKLRN 654>XP_005254013 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1171 NRSKLRN 1177>XP_005254012 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1177 NRSKLRN 1183>XP_005254011 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1208 NRSKLRN 1214>XP_006718544 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 928 NRSKLRN 934>XP_006718543 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 939 NRSKLRN 945>XP_006718542 Length = 1145 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NRSLLRN 7 NRS LRN Sbjct: 1017 NRSKLRN 1023>XP_006716813 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 + SL+RNS+ Sbjct: 338 HNSLMRNSI 346>XP_005251482 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 + SL+RNS+ Sbjct: 338 HNSLMRNSI 346>XP_005251483 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NRSLLRNSL 9 + SL+RNS+ Sbjct: 338 HNSLMRNSI 346>XP_005245096 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSLLRNSL 9 RS+LRN L Sbjct: 240 RSMLRNVL 247Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.130 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 364,860 Number of extensions: 559 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |