Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001135993 18 1935 NP_001135991 18 1935 NP_071357 18 1935 NP_942144 18 1935 NP_001135992 18 1935 NP_004459 17 3301 NP_001230807 17 3301 XP_005270683 17 3301 NP_002221 16 5631 NP_000050 16 5631 NP_068831 16 5631 NP_001159906 16 5631 NP_002206 16 5631 NP_005240 16 5631 NP_777576 16 5631 XP_006721941 16 5631 XP_006721940 16 5631 XP_006721939 16 5631 XP_006721938 16 5631 XP_006721937 16 5631 XP_006721936 16 5631 XP_006721935 16 5631 XP_006721934 16 5631 XP_005257370 16 5631 NP_001164409 16 7355 NP_057452 16 7355 NP_001240318 16 7355 NP_001269472 16 7355 NP_000456 16 7355 XP_006722829 16 7355 NP_699189 16 7355 NP_001004731 16 7355 NP_001154824 15 9605 NP_059138 15 9605 NP_060664 15 9605 NP_001164059 15 9605 NP_001116306 15 9605 NP_001164035 15 9605 NP_001164051 15 9605 NP_055520 15 9605 NP_149981 15 9605 NP_001164058 15 9605 NP_001139806 15 9605 XP_006726609 15 9605 XP_005260222 15 9605 XP_006719787 15 9605 XP_005269838 15 9605 XP_005269835 15 9605 XP_005269837 15 9605 XP_006716252 15 9605 XP_006716251 15 9605 XP_006715737 15 9605 XP_006711504 15 9605 XP_006710027 15 9605>NP_001135993 Length = 611 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NRCSTSLL 8 N CSTSL+ Sbjct: 34 NNCSTSLM 41>NP_001135991 Length = 611 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NRCSTSLL 8 N CSTSL+ Sbjct: 34 NNCSTSLM 41>NP_071357 Length = 611 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NRCSTSLL 8 N CSTSL+ Sbjct: 34 NNCSTSLM 41>NP_942144 Length = 611 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NRCSTSLL 8 N CSTSL+ Sbjct: 34 NNCSTSLM 41>NP_001135992 Length = 611 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NRCSTSLL 8 N CSTSL+ Sbjct: 34 NNCSTSLM 41>NP_004459 Length = 280 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RCSTSL+ Sbjct: 253 RCSTSLV 259>NP_001230807 Length = 172 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RCSTSL+ Sbjct: 145 RCSTSLV 151>XP_005270683 Length = 280 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RCSTSL+ Sbjct: 253 RCSTSLV 259>NP_002221 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>NP_000050 Length = 3418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TSL+ Sbjct: 3385 RCTTSLI 3391>NP_068831 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>NP_001159906 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTSLL Sbjct: 105 CSTSLL 110>NP_002206 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTSLL Sbjct: 247 CSTSLL 252>NP_005240 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NRCSTSLLA 9 N CS +LLA Sbjct: 403 NPCSVNLLA 411>NP_777576 Length = 1749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RCSTSLLA 9 RCSTS ++ Sbjct: 573 RCSTSFIS 580>XP_006721941 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>XP_006721940 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>XP_006721939 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>XP_006721938 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>XP_006721937 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>XP_006721936 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 203 RCTTSIL 209>XP_006721935 Length = 762 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 220 RCTTSIL 226>XP_006721934 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 241 RCTTSIL 247>XP_005257370 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RCSTSLL 8 RC+TS+L Sbjct: 241 RCTTSIL 247>NP_001164409 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N C SLLA Sbjct: 361 NTCEDSLLA 369>NP_057452 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N C SLLA Sbjct: 415 NTCEDSLLA 423>NP_001240318 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N C SLLA Sbjct: 287 NTCEDSLLA 295>NP_001269472 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RCSTSLLA 9 RC TS+L+ Sbjct: 316 RCRTSILS 323>NP_000456 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RCSTSLLA 9 RC TS+L+ Sbjct: 335 RCRTSILS 342>XP_006722829 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N C SLLA Sbjct: 610 NTCEDSLLA 618>NP_699189 Length = 576 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RCSTSL 7 RCSTS+ Sbjct: 310 RCSTSI 315>NP_001004731 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RCSTSLL 8 RCSTS + Sbjct: 32 RCSTSFM 38>NP_001154824 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N CSTS A Sbjct: 747 NDCSTSFRA 755>NP_059138 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CSTSLLA 9 CSTSL A Sbjct: 596 CSTSLRA 602>NP_060664 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 434 CSTSML 439>NP_001164059 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 369 CSTSML 374>NP_001116306 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 434 CSTSML 439>NP_001164035 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 297 CSTSML 302>NP_001164051 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 434 CSTSML 439>NP_055520 Length = 1966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRCSTS 6 +RCSTS Sbjct: 1855 SRCSTS 1860>NP_149981 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCSTSLLA 9 RC TSL A Sbjct: 320 RCPTSLQA 327>NP_001164058 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 435 CSTSML 440>NP_001139806 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CSTSLLA 9 CS SLLA Sbjct: 234 CSLSLLA 240>XP_006726609 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RCSTSL 7 RC+TSL Sbjct: 105 RCATSL 110>XP_005260222 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCSTSLLA 9 RC TSL A Sbjct: 200 RCPTSLQA 207>XP_006719787 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RCSTSL 7 RC+TSL Sbjct: 105 RCATSL 110>XP_005269838 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N CSTS A Sbjct: 747 NDCSTSFRA 755>XP_005269835 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N CSTS A Sbjct: 751 NDCSTSFRA 759>XP_005269837 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NRCSTSLLA 9 N CSTS A Sbjct: 754 NDCSTSFRA 762>XP_006716252 Length = 1937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRCSTS 6 +RCSTS Sbjct: 1826 SRCSTS 1831>XP_006716251 Length = 1975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NRCSTS 6 +RCSTS Sbjct: 1864 SRCSTS 1869>XP_006715737 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CSTSLLA 9 CS SLLA Sbjct: 234 CSLSLLA 240>XP_006711504 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSTSLL 8 CSTS+L Sbjct: 468 CSTSML 473>XP_006710027 Length = 2837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RCSTSL 7 RC+TSL Sbjct: 105 RCATSL 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.120 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 558,495 Number of extensions: 443 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |