Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 20 299 NP_004561 20 299 NP_001275703 20 299 XP_005253450 20 299 XP_006719151 20 299 NP_064502 19 869 NP_036558 17 3301 NP_964014 17 3301 NP_004280 17 4312 NP_068749 17 4312 NP_001123553 16 5631 NP_002653 16 5631 XP_005247591 16 5631 XP_005247590 16 5631 NP_950245 16 7355 NP_001243057 16 7355 NP_001243056 16 7355 NP_061028 16 7355 NP_037423 16 7355 XP_006716612 16 7355 XP_006716611 16 7355 NP_001122306 15 9605 NP_001106849 15 9605 NP_060663 15 9605 NP_000524 15 9605 NP_065194 15 9605 NP_955772 15 9605 NP_001258769 15 9605 NP_689614 15 9605 NP_055506 15 9605 NP_001185731 15 9605 NP_001185730 15 9605 NP_149061 15 9605 NP_003751 15 9605 NP_848658 15 9605 NP_001185732 15 9605 XP_005261294 15 9605 XP_005261293 15 9605 XP_006718010 15 9605 XP_006716025 15 9605 XP_006716024 15 9605 XP_005265785 15 9605 NP_003206 15 9605 NP_060299 15 9605>NP_001275701 Length = 1486 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 N YLIQVTH Sbjct: 1260 NLYLIQVTH 1268>NP_004561 Length = 1445 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 N YLIQVTH Sbjct: 1219 NLYLIQVTH 1227>NP_001275703 Length = 1264 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 N YLIQVTH Sbjct: 1038 NLYLIQVTH 1046>XP_005253450 Length = 1486 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 N YLIQVTH Sbjct: 1260 NLYLIQVTH 1268>XP_006719151 Length = 1486 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 N YLIQVTH Sbjct: 1260 NLYLIQVTH 1268>NP_064502 Length = 1176 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NQYLIQVTH 9 +QYL++VTH Sbjct: 899 SQYLMEVTH 907>NP_036558 Length = 1217 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NQYLIQVTH 9 N YL Q+ H Sbjct: 355 NHYLYQIAH 363>NP_964014 Length = 175 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NQYLIQVT 8 NQYL Q+T Sbjct: 165 NQYLPQIT 172>NP_004280 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NQYLIQVTH 9 N Y +Q TH Sbjct: 660 NHYALQCTH 668>NP_068749 Length = 792 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 NQ+L Q TH Sbjct: 118 NQFLEQETH 126>NP_001123553 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 N Y I++TH Sbjct: 101 NLYTIELTH 109>NP_002653 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 N Y I++TH Sbjct: 101 NLYTIELTH 109>XP_005247591 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 N Y I++TH Sbjct: 101 NLYTIELTH 109>XP_005247590 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 N Y I++TH Sbjct: 101 NLYTIELTH 109>NP_950245 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NQYLIQV 7 NQY IQV Sbjct: 330 NQYSIQV 336>NP_001243057 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NQYLIQV 7 NQY IQV Sbjct: 281 NQYSIQV 287>NP_001243056 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NQYLIQV 7 NQY IQV Sbjct: 281 NQYSIQV 287>NP_061028 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NQYLIQV 7 N YL+QV Sbjct: 266 NSYLVQV 272>NP_037423 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NQYLIQVT 8 N+Y++QV+ Sbjct: 615 NRYIVQVS 622>XP_006716612 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NQYLIQVT 8 N+Y++QV+ Sbjct: 537 NRYIVQVS 544>XP_006716611 Length = 1440 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NQYLIQVT 8 N+Y++QV+ Sbjct: 615 NRYIVQVS 622>NP_001122306 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 +YLI V H Sbjct: 59 EYLINVIH 66>NP_001106849 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QYLIQVT 8 QY+IQ+T Sbjct: 172 QYVIQLT 178>NP_060663 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QYLIQVT 8 QY+IQ+T Sbjct: 172 QYVIQLT 178>NP_000524 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 +YLI V H Sbjct: 59 EYLINVIH 66>NP_065194 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QYLIQVTH 9 +++IQV H Sbjct: 551 EFMIQVNH 558>NP_955772 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 +YLI V H Sbjct: 59 EYLINVIH 66>NP_001258769 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 +YL Q TH Sbjct: 17 EYLTQQTH 24>NP_689614 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 NQY+ +VT+ Sbjct: 98 NQYVNEVTN 106>NP_055506 Length = 1485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YLIQVTH 9 +LIQ TH Sbjct: 1371 HLIQTTH 1377>NP_001185731 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 NQ+++ V H Sbjct: 52 NQHIMMVNH 60>NP_001185730 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 NQ+++ V H Sbjct: 45 NQHIMMVNH 53>NP_149061 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 +QYL + TH Sbjct: 326 HQYLQKATH 334>NP_003751 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 NQ+++ V H Sbjct: 45 NQHIMMVNH 53>NP_848658 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 QYL+ + H Sbjct: 749 QYLLPIVH 756>NP_001185732 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 NQ+++ V H Sbjct: 56 NQHIMMVNH 64>XP_005261294 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 +QYL + TH Sbjct: 137 HQYLQKATH 145>XP_005261293 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 +QYL + TH Sbjct: 165 HQYLQKATH 173>XP_006718010 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 +YL Q TH Sbjct: 17 EYLTQQTH 24>XP_006716025 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 QYL+ + H Sbjct: 749 QYLLPIVH 756>XP_006716024 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QYLIQVTH 9 QYL+ + H Sbjct: 749 QYLLPIVH 756>XP_005265785 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NQYLIQVTH 9 NQY+ +VT+ Sbjct: 98 NQYVNEVTN 106>NP_003206 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NQYLIQVTH 9 N+Y QV H Sbjct: 76 NKYPFQVVH 84>NP_060299 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NQYLIQVTH 9 +QYL + TH Sbjct: 296 HQYLQKATH 304Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.133 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 491,678 Number of extensions: 876 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |