Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_037385 16 7355 NP_001018067 16 7355 NP_056965 16 7355 NP_851607 16 7355 NP_065156 16 7355 XP_006718243 16 7355 XP_006718242 16 7355 XP_006718241 16 7355 XP_006718240 16 7355 XP_006711530 16 7355 XP_006711529 16 7355 XP_006711528 16 7355 NP_001268357 15 9605 NP_036276 15 9605 NP_001268675 15 9605 NP_055160 15 9605 XP_006716821 15 9605 XP_006716820 15 9605 XP_006716819 15 9605 XP_006716818 15 9605 NP_001025052 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 553 DQMVFSEQA 561>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 553 DQMVFSEQA 561>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NQMVFSEQA 9 +QMVFSEQA Sbjct: 554 DQMVFSEQA 562>NP_037385 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 125 QMVFSE 130>NP_001018067 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 125 QMVFSE 130>NP_056965 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 125 QMVFSE 130>NP_851607 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NQMVFSE 7 NQ+VF+E Sbjct: 296 NQLVFAE 302>NP_065156 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NQMVFSE 7 NQ+VF+E Sbjct: 296 NQLVFAE 302>XP_006718243 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 188 QMVFSE 193>XP_006718242 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 188 QMVFSE 193>XP_006718241 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 125 QMVFSE 130>XP_006718240 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QMVFSE 7 QMVFSE Sbjct: 188 QMVFSE 193>XP_006711530 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NQMVFSE 7 NQ+VF+E Sbjct: 296 NQLVFAE 302>XP_006711529 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NQMVFSE 7 NQ+VF+E Sbjct: 154 NQLVFAE 160>XP_006711528 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NQMVFSE 7 NQ+VF+E Sbjct: 296 NQLVFAE 302>NP_001268357 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 NQ FSE+A Sbjct: 194 NQFNFSERA 202>NP_036276 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 NQ FSE+A Sbjct: 190 NQFNFSERA 198>NP_001268675 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 N +FSEQA Sbjct: 888 NSDLFSEQA 896>NP_055160 Length = 2279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VFSEQA 9 VFSEQA Sbjct: 1545 VFSEQA 1550>XP_006716821 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 NQ FSE+A Sbjct: 13 NQFNFSERA 21>XP_006716820 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 NQ FSE+A Sbjct: 225 NQFNFSERA 233>XP_006716819 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 NQ FSE+A Sbjct: 221 NQFNFSERA 229>XP_006716818 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NQMVFSEQA 9 NQ FSE+A Sbjct: 225 NQFNFSERA 233>NP_001025052 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VFSEQA 9 VFSEQA Sbjct: 91 VFSEQA 96Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.115 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,323 Number of extensions: 609 Number of successful extensions: 30 Number of sequences better than 10000.0: 30 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |