Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_064450                                                              22     134
XP_005273257                                                           22     134
XP_005276653                                                           18    1935
XP_005256952                                                           18    1935
XP_005275865                                                           18    1935
NP_640339                                                              17    2528
NP_071938                                                              17    2528
XP_006717042                                                           17    2528
XP_005251797                                                           17    2528
NP_085128                                                              17    3301
NP_055985                                                              17    3301
NP_001121678                                                           17    3301
NP_001121676                                                           17    3301
NP_001121677                                                           17    3301
NP_001078956                                                           17    3301
NP_001135885                                                           17    3301
NP_005131                                                              17    3301
XP_006716505                                                           17    3301
XP_006716504                                                           17    3301
XP_006716503                                                           17    3301
XP_006716502                                                           17    3301
XP_006716501                                                           17    3301
XP_006710377                                                           17    3301
NP_001001938                                                           17    3301
NP_001757                                                              17    4312
XP_006711684                                                           17    4312
XP_005245640                                                           17    4312
XP_006711683                                                           17    4312
NP_001008844                                                           16    5631
NP_004406                                                              16    5631
NP_060897                                                              16    5631
NP_001076                                                              16    5631
XP_006726677                                                           16    5631
XP_005276561                                                           16    5631
XP_005276560                                                           16    5631
XP_003960700                                                           16    5631
XP_006725262                                                           16    5631
XP_006725261                                                           16    5631
XP_006725260                                                           16    5631
XP_005255434                                                           16    5631
XP_005255433                                                           16    5631
XP_005255432                                                           16    5631
NP_057511                                                              16    5631
NP_005426                                                              16    7355
NP_064630                                                              16    7355
NP_001003702                                                           16    7355
NP_777597                                                              16    7355
NP_653205                                                              16    7355
NP_079105                                                              16    7355
XP_006726519                                                           16    7355
XP_005256339                                                           16    7355
XP_006720410                                                           16    7355
XP_006716191                                                           16    7355
XP_006716190                                                           16    7355
XP_005267114                                                           16    7355
NP_619639                                                              15    9605
NP_000060                                                              15    9605
NP_733842                                                              15    9605
NP_001157569                                                           15    9605
NP_001127807                                                           15    9605
NP_071351                                                              15    9605
NP_055228                                                              15    9605
NP_004376                                                              15    9605
NP_001242952                                                           15    9605
NP_058625                                                              15    9605
NP_001107558                                                           15    9605
NP_653267                                                              15    9605
NP_055073                                                              15    9605
NP_036233                                                              15    9605
NP_064613                                                              15    9605
NP_079151                                                              15    9605
NP_001107605                                                           15    9605
XP_006723744                                                           15    9605
XP_005260304                                                           15    9605
XP_006718949                                                           15    9605
XP_005271547                                                           15    9605
XP_005271544                                                           15    9605
XP_005270217                                                           15    9605
XP_005270216                                                           15    9605
XP_005270215                                                           15    9605
XP_006715718                                                           15    9605
XP_006715178                                                           15    9605
XP_006715177                                                           15    9605
XP_005245535                                                           15    9605
NP_955469                                                              15    9605
NP_955471                                                              15    9605
NP_955470                                                              15    9605
>NP_064450
          Length = 1722

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NQDKGTRKQ 9
            NQDKG+RKQ
Sbjct: 1277 NQDKGSRKQ 1285
>XP_005273257
          Length = 1726

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NQDKGTRKQ 9
            NQDKG+RKQ
Sbjct: 1281 NQDKGSRKQ 1289
>XP_005276653
          Length = 195

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  NQDKGTRK 8
          NQD GTR+
Sbjct: 73 NQDMGTRR 80
>XP_005256952
          Length = 195

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  NQDKGTRK 8
          NQD GTR+
Sbjct: 73 NQDMGTRR 80
>XP_005275865
          Length = 195

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  NQDKGTRK 8
          NQD GTR+
Sbjct: 73 NQDMGTRR 80
>NP_640339
          Length = 516

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QDKGTRK 8
           QDKG+RK
Sbjct: 460 QDKGSRK 466
>NP_071938
          Length = 476

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  NQDKGTRK 8
          NQD GTR+
Sbjct: 53 NQDGGTRR 60
>XP_006717042
          Length = 290

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QDKGTRK 8
           QDKG+RK
Sbjct: 234 QDKGSRK 240
>XP_005251797
          Length = 475

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QDKGTRK 8
           QDKG+RK
Sbjct: 419 QDKGSRK 425
>NP_085128
          Length = 2136

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    NQDKGTRKQ 9
            NQ+KGT +Q
Sbjct: 1117 NQEKGTIQQ 1125
>NP_055985
          Length = 871

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>NP_001121678
          Length = 871

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>NP_001121676
          Length = 871

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>NP_001121677
          Length = 871

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>NP_001078956
          Length = 828

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   NQDKGTR 7
           N+DKGT+
Sbjct: 188 NEDKGTK 194
>NP_001135885
          Length = 183

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NQDKGTRKQ 9
          N+D GTR++
Sbjct: 74 NRDSGTRRR 82
>NP_005131
          Length = 664

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           +DKGT+K+
Sbjct: 120 EDKGTKKK 127
>XP_006716505
          Length = 630

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 443 NKEKGVKKQ 451
>XP_006716504
          Length = 881

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 443 NKEKGVKKQ 451
>XP_006716503
          Length = 1122

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>XP_006716502
          Length = 1122

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>XP_006716501
          Length = 1122

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N++KG +KQ
Sbjct: 684 NKEKGVKKQ 692
>XP_006710377
          Length = 827

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   NQDKGTR 7
           N+DKGT+
Sbjct: 188 NEDKGTK 194
>NP_001001938
          Length = 202

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N+D GTR++
Sbjct: 93  NRDSGTRRR 101
>NP_001757
          Length = 335

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NQDKGTRK 8
           NQDK TR+
Sbjct: 167 NQDKWTRE 174
>XP_006711684
          Length = 231

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  NQDKGTRK 8
          NQDK TR+
Sbjct: 63 NQDKWTRE 70
>XP_005245640
          Length = 231

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  NQDKGTRK 8
          NQDK TR+
Sbjct: 63 NQDKWTRE 70
>XP_006711683
          Length = 242

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   NQDKGTRK 8
           NQDK TR+
Sbjct: 167 NQDKWTRE 174
>NP_001008844
          Length = 2272

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    QDKGTRKQ 9
            Q++GTRK+
Sbjct: 1179 QEEGTRKR 1186
>NP_004406
          Length = 2871

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    QDKGTRKQ 9
            Q++GTRK+
Sbjct: 1179 QEEGTRKR 1186
>NP_060897
          Length = 651

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 439 NQDSGTK 445
>NP_001076
          Length = 423

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  NQDKGT 6
          NQD+GT
Sbjct: 38 NQDRGT 43
>XP_006726677
          Length = 213

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  NQDKGTR 7
          NQD GT+
Sbjct: 83 NQDSGTK 89
>XP_005276561
          Length = 220

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  NQDKGTR 7
          NQD GT+
Sbjct: 83 NQDSGTK 89
>XP_005276560
          Length = 224

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  NQDKGTR 7
          NQD GT+
Sbjct: 83 NQDSGTK 89
>XP_003960700
          Length = 247

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  NQDKGTR 7
          NQD GT+
Sbjct: 83 NQDSGTK 89
>XP_006725262
          Length = 439

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 227 NQDSGTK 233
>XP_006725261
          Length = 439

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 227 NQDSGTK 233
>XP_006725260
          Length = 621

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 409 NQDSGTK 415
>XP_005255434
          Length = 439

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 227 NQDSGTK 233
>XP_005255433
          Length = 439

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 227 NQDSGTK 233
>XP_005255432
          Length = 621

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           NQD GT+
Sbjct: 409 NQDSGTK 415
>NP_057511
          Length = 753

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   NQDKGTRK 8
           N+ KGTR+
Sbjct: 415 NESKGTRE 422
>NP_005426
          Length = 1597

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NQDKGTRKQ 9
           N +KG +KQ
Sbjct: 266 NDEKGEQKQ 274
>NP_064630
          Length = 1543

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    NQDKGTRK 8
            NQ +G+RK
Sbjct: 1421 NQSQGSRK 1428
>NP_001003702
          Length = 484

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NQDKGTRKQ 9
           N +KG +KQ
Sbjct: 266 NDEKGEQKQ 274
>NP_777597
          Length = 586

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   QDKGTR 7
           +DKGTR
Sbjct: 435 EDKGTR 440
>NP_653205
          Length = 953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   DKGTRKQ 9
           DKG+RK+
Sbjct: 826 DKGSRKR 832
>NP_079105
          Length = 553

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   QDKGTRK 8
           QDK TRK
Sbjct: 142 QDKWTRK 148
>XP_006726519
          Length = 1493

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NQDKGTRKQ 9
           N +KG +KQ
Sbjct: 247 NDEKGEQKQ 255
>XP_005256339
          Length = 977

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   DKGTRKQ 9
           DKG+RK+
Sbjct: 850 DKGSRKR 856
>XP_006720410
          Length = 139

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  QDKGTRKQ 9
          +D+GTR++
Sbjct: 54 RDRGTRRE 61
>XP_006716191
          Length = 1543

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NQDKGTRKQ 9
           N +KG +KQ
Sbjct: 266 NDEKGEQKQ 274
>XP_006716190
          Length = 1597

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NQDKGTRKQ 9
           N +KG +KQ
Sbjct: 266 NDEKGEQKQ 274
>XP_005267114
          Length = 1543

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    NQDKGTRK 8
            NQ +G+RK
Sbjct: 1421 NQSQGSRK 1428
>NP_619639
          Length = 4074

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N+D+GT +Q
Sbjct: 431 NRDEGTWQQ 439
>NP_000060
          Length = 1873

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  QDKGTRKQ 9
          QD+G RK+
Sbjct: 7  QDEGLRKK 14
>NP_733842
          Length = 3396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           N+D+GT +Q
Sbjct: 431 NRDEGTWQQ 439
>NP_001157569
          Length = 2409

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   NQDKGTRK 8
           + D GTRK
Sbjct: 777 SSDSGTRK 784
>NP_001127807
          Length = 629

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           +QDKG R
Sbjct: 614 SQDKGVR 620
>NP_071351
          Length = 2752

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           QD+GT+++
Sbjct: 362 QDEGTKEE 369
>NP_055228
          Length = 630

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NQDKGTR 7
           +QDKG R
Sbjct: 615 SQDKGVR 621
>NP_004376
          Length = 3396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    NQDKGTRK 8
            + D GTRK
Sbjct: 1764 SSDSGTRK 1771
>NP_001242952
          Length = 205

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           +DKG+R++
Sbjct: 167 EDKGSRRK 174
>NP_058625
          Length = 251

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           +DKG+R++
Sbjct: 167 EDKGSRRK 174
>NP_001107558
          Length = 410

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           +DKG+R++
Sbjct: 326 EDKGSRRK 333
>NP_653267
          Length = 4753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    QDKGTR 7
            Q+KGTR
Sbjct: 2770 QEKGTR 2775
>NP_055073
          Length = 1530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   NQDKGTR 7
           N DKG R
Sbjct: 456 NSDKGNR 462
>NP_036233
          Length = 588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           ++DK TR+Q
Sbjct: 358 HEDKQTREQ 366
>NP_064613
          Length = 1160

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   DKGTRKQ 9
           DKG RK+
Sbjct: 258 DKGDRKE 264
>NP_079151
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   KGTRKQ 9
           +GTRKQ
Sbjct: 406 RGTRKQ 411
>NP_001107605
          Length = 977

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   KGTRKQ 9
           +GTRKQ
Sbjct: 630 RGTRKQ 635
>XP_006723744
          Length = 847

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   NQDKGTR 7
           N DKG R
Sbjct: 456 NSDKGNR 462
>XP_005260304
          Length = 1530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   NQDKGTR 7
           N DKG R
Sbjct: 456 NSDKGNR 462
>XP_006718949
          Length = 645

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   DKGTRKQ 9
           DKG RK+
Sbjct: 258 DKGDRKE 264
>XP_005271547
          Length = 321

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NQDKGTRKQ 9
          ++DK TR+Q
Sbjct: 91 HEDKQTREQ 99
>XP_005271544
          Length = 588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   NQDKGTRKQ 9
           ++DK TR+Q
Sbjct: 358 HEDKQTREQ 366
>XP_005270217
          Length = 681

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   KGTRKQ 9
           +GTRKQ
Sbjct: 334 RGTRKQ 339
>XP_005270216
          Length = 681

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   KGTRKQ 9
           +GTRKQ
Sbjct: 334 RGTRKQ 339
>XP_005270215
          Length = 681

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   KGTRKQ 9
           +GTRKQ
Sbjct: 334 RGTRKQ 339
>XP_006715718
          Length = 392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   QDKGTRK 8
           QD GTR+
Sbjct: 105 QDPGTRR 111
>XP_006715178
          Length = 210

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           +DKG+R++
Sbjct: 167 EDKGSRRK 174
>XP_006715177
          Length = 212

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   QDKGTRKQ 9
           +DKG+R++
Sbjct: 167 EDKGSRRK 174
>XP_005245535
          Length = 1854

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  QDKGTRKQ 9
          QD+G RK+
Sbjct: 7  QDEGLRKK 14
>NP_955469
          Length = 1156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   DKGTRKQ 9
           DKG RK+
Sbjct: 258 DKGDRKE 264
>NP_955471
          Length = 1023

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   DKGTRKQ 9
           DKG RK+
Sbjct: 172 DKGDRKE 178
>NP_955470
          Length = 1061

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   DKGTRKQ 9
           DKG RK+
Sbjct: 172 DKGDRKE 178
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.298    0.118    0.313 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 700,740
Number of extensions: 1610
Number of successful extensions: 87
Number of sequences better than 10000.0: 87
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 87
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.1 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package