Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 509 XP_006714104 20 509 XP_005265800 20 509 XP_006714103 20 509 XP_006714102 20 509 NP_001229619 17 2528 NP_005112 17 2528 NP_078810 17 2528 NP_114113 17 3301 NP_001265088 17 3301 NP_006160 17 3301 NP_001092102 17 3301 NP_115751 17 3301 NP_001092103 17 3301 NP_001265089 17 3301 NP_004229 17 4312 NP_001271144 17 4312 NP_001271143 17 4312 NP_001271145 17 4312 XP_005259547 17 4312 XP_006712916 17 4312 XP_005247020 17 4312 XP_005247019 17 4312 XP_006712915 17 4312 XP_005247018 17 4312 XP_005247017 17 4312 XP_005247015 17 4312 XP_005247014 17 4312 XP_005247013 17 4312 XP_005247012 17 4312 XP_005247011 17 4312 NP_066925 16 5631 NP_001159575 16 5631 NP_619642 16 5631 NP_803884 16 5631 NP_115553 16 5631 NP_001004124 16 5631 NP_001229269 16 7355 NP_776168 16 7355 NP_001124429 16 7355 NP_003261 16 7355 NP_001265669 16 7355 NP_001265671 16 7355 NP_001265670 16 7355 NP_659484 16 7355 XP_006716574 16 7355 XP_005268519 16 7355 XP_006714849 16 7355 XP_005268518 16 7355 XP_006711820 16 7355 XP_005273147 16 7355 XP_006711819 16 7355 XP_006710422 16 7355 XP_005270519 16 7355 XP_005270518 16 7355 NP_057547 16 7355 NP_996816 15 9605 NP_001073932 15 9605 NP_001368 15 9605 NP_065136 15 9605 NP_982354 15 9605 NP_001005340 15 9605 NP_002501 15 9605 XP_005266465 15 9605 XP_005266464 15 9605 XP_005266463 15 9605 XP_006718966 15 9605 XP_005249635 15 9605 NP_001073296 15 9605>NP_006197 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 NNSGLFV V Sbjct: 76 NNSGLFVTV 84>XP_006714104 Length = 832 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 NNSGLFV V Sbjct: 101 NNSGLFVTV 109>XP_005265800 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 NNSGLFV V Sbjct: 76 NNSGLFVTV 84>XP_006714103 Length = 1111 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 NNSGLFV V Sbjct: 98 NNSGLFVTV 106>XP_006714102 Length = 1114 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 NNSGLFV V Sbjct: 101 NNSGLFVTV 109>NP_001229619 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 NNSGLF + Sbjct: 293 NNSGLFFL 300>NP_005112 Length = 2174 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 NNSGLF+ Sbjct: 1136 NNSGLFL 1142>NP_078810 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 NNSGLF + Sbjct: 293 NNSGLFFL 300>NP_114113 Length = 913 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 NN+GLF+ Sbjct: 77 NNNGLFI 83>NP_001265088 Length = 256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 +N GLFVM Sbjct: 124 DNGGLFVM 131>NP_006160 Length = 264 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNSGLFVMV 9 NN GLF +V Sbjct: 248 NNEGLFSLV 256>NP_001092102 Length = 256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 +N GLFVM Sbjct: 124 DNGGLFVM 131>NP_115751 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 +N GLFVM Sbjct: 144 DNGGLFVM 151>NP_001092103 Length = 256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 +N GLFVM Sbjct: 124 DNGGLFVM 131>NP_001265089 Length = 256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 +N GLFVM Sbjct: 124 DNGGLFVM 131>NP_004229 Length = 1992 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 664 SSGMFIMV 671>NP_001271144 Length = 2025 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 670 SSGMFIMV 677>NP_001271143 Length = 2040 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>NP_001271145 Length = 1722 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 367 SSGMFIMV 374>XP_005259547 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NNSGLFV 7 NNSG FV Sbjct: 341 NNSGAFV 347>XP_006712916 Length = 1998 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 670 SSGMFIMV 677>XP_005247020 Length = 2013 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>XP_005247019 Length = 2025 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 670 SSGMFIMV 677>XP_006712915 Length = 2026 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 670 SSGMFIMV 677>XP_005247018 Length = 2026 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 670 SSGMFIMV 677>XP_005247017 Length = 2039 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 683 SSGMFIMV 690>XP_005247015 Length = 2041 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>XP_005247014 Length = 2063 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>XP_005247013 Length = 2067 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>XP_005247012 Length = 2068 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>XP_005247011 Length = 2068 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 +SG+F+MV Sbjct: 712 SSGMFIMV 719>NP_066925 Length = 252 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SGLFVMV 9 +GLFVMV Sbjct: 202 AGLFVMV 208>NP_001159575 Length = 195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SGLFVMV 9 +GLFVMV Sbjct: 145 AGLFVMV 151>NP_619642 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 + +GLFVM+ Sbjct: 677 HGAGLFVMI 685>NP_803884 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 + +GLFVM+ Sbjct: 423 HGAGLFVMI 431>NP_115553 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSGLFVM 8 N GLF+M Sbjct: 271 NGGLFIM 277>NP_001004124 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNSGLFVMV 9 NNS LF+++ Sbjct: 5 NNSTLFILL 13>NP_001229269 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 N+GL+V+V Sbjct: 465 NTGLYVIV 472>NP_776168 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 N+GL+V+V Sbjct: 616 NTGLYVIV 623>NP_001124429 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 N+GL+V+V Sbjct: 616 NTGLYVIV 623>NP_003261 Length = 245 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NNSGLFVMV 9 NN G F+ V Sbjct: 193 NNEGCFIKV 201>NP_001265669 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NNSGLFVMV 9 NN G F+ V Sbjct: 105 NNEGCFIKV 113>NP_001265671 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NNSGLFVMV 9 NN G F+ V Sbjct: 105 NNEGCFIKV 113>NP_001265670 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NNSGLFVMV 9 NN G F+ V Sbjct: 105 NNEGCFIKV 113>NP_659484 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 NN+G FV+ Sbjct: 183 NNNGRFVL 190>XP_006716574 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +NSG+FV Sbjct: 939 HNSGIFV 945>XP_005268519 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSGLFVM 8 N GLF+M Sbjct: 217 NPGLFIM 223>XP_006714849 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSGLFVM 8 N GLF+M Sbjct: 217 NPGLFIM 223>XP_005268518 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSGLFVM 8 N GLF+M Sbjct: 217 NPGLFIM 223>XP_006711820 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 N+GL+V+V Sbjct: 474 NTGLYVIV 481>XP_005273147 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 N+GL+V+V Sbjct: 474 NTGLYVIV 481>XP_006711819 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSGLFVMV 9 N+GL+V+V Sbjct: 549 NTGLYVIV 556>XP_006710422 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 NN+G FV+ Sbjct: 193 NNNGRFVL 200>XP_005270519 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 NN+G FV+ Sbjct: 193 NNNGRFVL 200>XP_005270518 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNSGLFVM 8 NN+G FV+ Sbjct: 193 NNNGRFVL 200>NP_057547 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSGLFVM 8 N GLF+M Sbjct: 217 NPGLFIM 223>NP_996816 Length = 5202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +NSGL+V Sbjct: 5169 HNSGLYV 5175>NP_001073932 Length = 4314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +NSG+F+ Sbjct: 1783 SNSGIFI 1789>NP_001368 Length = 4307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +NSG+F+ Sbjct: 1783 SNSGIFI 1789>NP_065136 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NNSGLF 6 NN GLF Sbjct: 721 NNKGLF 726>NP_982354 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NNSGLF 6 NN GLF Sbjct: 721 NNKGLF 726>NP_001005340 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +N+GLFV Sbjct: 287 DNTGLFV 293>NP_002501 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +N+GLFV Sbjct: 287 DNTGLFV 293>XP_005266465 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NNSGLF 6 NN GLF Sbjct: 721 NNKGLF 726>XP_005266464 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NNSGLF 6 NN GLF Sbjct: 721 NNKGLF 726>XP_005266463 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NNSGLF 6 NN GLF Sbjct: 721 NNKGLF 726>XP_006718966 Length = 4300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +NSG+F+ Sbjct: 1783 SNSGIFI 1789>XP_005249635 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NNSGLFV 7 +N+GLFV Sbjct: 287 DNTGLFV 293>NP_001073296 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSGLFVMV 9 N+GL VM+ Sbjct: 94 NAGLHVMI 101Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.139 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,214 Number of extensions: 554 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |