Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_919278 17 3301 XP_006712459 17 3301 NP_056349 16 5631 NP_001035918 16 5631 NP_057626 16 5631 NP_001035917 16 5631 NP_872311 16 5631 XP_006723719 16 5631 XP_005270784 16 5631 XP_005270783 16 5631 XP_005270782 16 5631 NP_963861 16 7355 NP_060238 16 7355 NP_001161707 16 7355 XP_005260640 16 7355 XP_005260639 16 7355 XP_006713498 16 7355 NP_003601 16 7355 NP_001015885 16 7355 NP_001070151 15 9605 NP_055048 15 9605 NP_001070152 15 9605 NP_001191006 15 9605 NP_004779 15 9605 NP_208325 15 9605 XP_006722124 15 9605 XP_006722123 15 9605 XP_006722122 15 9605 XP_005251756 15 9605 XP_005251755 15 9605 XP_005251754 15 9605 XP_005251753 15 9605 XP_005251752 15 9605 XP_005251751 15 9605 XP_005251750 15 9605 XP_005251749 15 9605 XP_005251374 15 9605 NP_588615 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 NLSSNEAI Sbjct: 839 NLSSNEAI 846>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 NLSSNEAI Sbjct: 839 NLSSNEAI 846>NP_919278 Length = 1925 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN+S NE I Sbjct: 1463 NNISKNEEI 1471>XP_006712459 Length = 1914 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN+S NE I Sbjct: 1452 NNISKNEEI 1460>NP_056349 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NNLSSNE 7 NNLS NE Sbjct: 408 NNLSPNE 414>NP_001035918 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN S N+AI Sbjct: 293 NNASRNQAI 301>NP_057626 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN S N+AI Sbjct: 370 NNASRNQAI 378>NP_001035917 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN S N+AI Sbjct: 308 NNASRNQAI 316>NP_872311 Length = 157 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NNLSSN 6 NNLSSN Sbjct: 121 NNLSSN 126>XP_006723719 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 NLSSN++I Sbjct: 272 NLSSNKSI 279>XP_005270784 Length = 902 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NNLSSNE 7 NNLS NE Sbjct: 408 NNLSPNE 414>XP_005270783 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NNLSSNE 7 NNLS NE Sbjct: 408 NNLSPNE 414>XP_005270782 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NNLSSNE 7 NNLS NE Sbjct: 408 NNLSPNE 414>NP_963861 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NLSSNE 7 NLSSNE Sbjct: 143 NLSSNE 148>NP_060238 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NLSSNE 7 NLSSNE Sbjct: 203 NLSSNE 208>NP_001161707 Length = 2139 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NLSSNE 7 NLSSNE Sbjct: 846 NLSSNE 851>XP_005260640 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 +LSSN+AI Sbjct: 152 DLSSNQAI 159>XP_005260639 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 +LSSN+AI Sbjct: 180 DLSSNQAI 187>XP_006713498 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NLSSNE 7 NLSSNE Sbjct: 142 NLSSNE 147>NP_003601 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 +LSSN+AI Sbjct: 114 DLSSNQAI 121>NP_001015885 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNEAI 9 +LSSN+AI Sbjct: 114 DLSSNQAI 121>NP_001070151 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNLSSNEA 8 NNL SN++ Sbjct: 36 NNLPSNDS 43>NP_055048 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNLSSNEA 8 NNL SN++ Sbjct: 36 NNLPSNDS 43>NP_001070152 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNLSSNEA 8 NNL SN++ Sbjct: 36 NNLPSNDS 43>NP_001191006 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NNLSSN 6 NN+SSN Sbjct: 8 NNISSN 13>NP_004779 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NNLSSN 6 NN+SSN Sbjct: 8 NNISSN 13>NP_208325 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN+S EAI Sbjct: 53 NNISKIEAI 61>XP_006722124 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNLSSNEA 8 NNL SN++ Sbjct: 36 NNLPSNDS 43>XP_006722123 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNLSSNEA 8 NNL SN++ Sbjct: 36 NNLPSNDS 43>XP_006722122 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NNLSSNEA 8 NNL SN++ Sbjct: 36 NNLPSNDS 43>XP_005251756 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 339 NNIASNQS 346>XP_005251755 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 359 NNIASNQS 366>XP_005251754 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 374 NNIASNQS 381>XP_005251753 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 387 NNIASNQS 394>XP_005251752 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 388 NNIASNQS 395>XP_005251751 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 420 NNIASNQS 427>XP_005251750 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 454 NNIASNQS 461>XP_005251749 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 455 NNIASNQS 462>XP_005251374 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NNLSSNEAI 9 NN+S EAI Sbjct: 53 NNISKIEAI 61>NP_588615 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNLSSNEA 8 NN++SN++ Sbjct: 327 NNIASNQS 334Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.106 0.245 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,686 Number of extensions: 700 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |