Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1482 NP_000242 18 1482 XP_005264389 18 1482 NP_000443 17 3301 NP_065954 17 4312 NP_001361 16 5631 XP_006712019 16 5631 NP_443075 16 7355 NP_001258152 16 7355 NP_001092093 16 7355 NP_065928 16 7355 XP_005256527 16 7355 XP_006711892 16 7355 XP_006711891 16 7355 XP_006711890 16 7355 XP_006711889 16 7355 XP_005273367 16 7355 XP_005273366 16 7355 XP_006711888 16 7355 XP_006711887 16 7355 XP_005273364 16 7355 XP_005273362 16 7355 XP_005273361 16 7355 XP_006711886 16 7355 XP_006711885 16 7355 XP_005273359 16 7355 XP_006711884 16 7355 XP_005273357 16 7355 XP_005273356 16 7355 XP_005273358 16 7355 XP_005273355 16 7355 XP_005273353 16 7355 XP_005273352 16 7355 XP_005273354 16 7355 XP_005273349 16 7355 XP_006711883 16 7355 XP_005273350 16 7355 XP_005273351 16 7355 XP_006711882 16 7355 XP_005273348 16 7355 XP_005273346 16 7355 XP_005273347 16 7355 XP_005273345 16 7355 XP_005273344 16 7355 NP_001091846 15 9605 NP_001010890 15 9605 NP_001139816 15 9605 NP_001013425 15 9605 NP_852607 15 9605 NP_714544 15 9605 NP_001258758 15 9605 XP_006726395 15 9605 XP_005276181 15 9605 XP_005276180 15 9605 XP_005276179 15 9605 XP_006725019 15 9605 XP_006720470 15 9605 XP_006716776 15 9605 XP_006711146 15 9605 XP_006711145 15 9605 XP_006711143 15 9605 XP_006710315 15 9605 NP_001010889 15 9605>NP_001245210 Length = 868 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLQSVVLS 9 NLQSVVLS Sbjct: 8 NLQSVVLS 15>NP_000242 Length = 934 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLQSVVLS 9 NLQSVVLS Sbjct: 74 NLQSVVLS 81>XP_005264389 Length = 921 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLQSVVLS 9 NLQSVVLS Sbjct: 74 NLQSVVLS 81>NP_000443 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NNLQSVVLS 9 NN+ SVVLS Sbjct: 27 NNILSVVLS 35>NP_065954 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NNLQSVVL 8 NN++SVVL Sbjct: 55 NNIRSVVL 62>NP_001361 Length = 4158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NNLQSVV 7 NNLQSV+ Sbjct: 846 NNLQSVL 852>XP_006712019 Length = 4158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NNLQSVV 7 NNLQSV+ Sbjct: 846 NNLQSVL 852>NP_443075 Length = 6620 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2483 LQSVVLS 2489>NP_001258152 Length = 8923 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2912 LQSVVLS 2918>NP_001092093 Length = 7968 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2483 LQSVVLS 2489>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNLQSVVLS 9 NN+QS++ S Sbjct: 2452 NNVQSIIES 2460>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNLQSVVLS 9 NN+QS++ S Sbjct: 2452 NNVQSIIES 2460>XP_006711892 Length = 6865 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2728 LQSVVLS 2734>XP_006711891 Length = 8925 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2912 LQSVVLS 2918>XP_006711890 Length = 6957 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711889 Length = 7297 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273367 Length = 7677 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273366 Length = 7678 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711888 Length = 8059 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711887 Length = 8499 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273364 Length = 8653 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273362 Length = 8675 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273361 Length = 8763 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711886 Length = 8833 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711885 Length = 8835 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273359 Length = 8843 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2636 LQSVVLS 2642>XP_006711884 Length = 8847 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273357 Length = 8851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273356 Length = 8851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273358 Length = 8851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273355 Length = 8924 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273353 Length = 8935 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2728 LQSVVLS 2734>XP_005273352 Length = 8935 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2728 LQSVVLS 2734>XP_005273354 Length = 8935 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2728 LQSVVLS 2734>XP_005273349 Length = 8939 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711883 Length = 8939 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273350 Length = 8939 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273351 Length = 8939 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_006711882 Length = 8977 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2770 LQSVVLS 2776>XP_005273348 Length = 9015 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273346 Length = 9026 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273347 Length = 9026 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273345 Length = 9026 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>XP_005273344 Length = 9027 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQSVVLS 9 LQSVVLS Sbjct: 2820 LQSVVLS 2826>NP_001091846 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>NP_001010890 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>NP_001139816 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>NP_001013425 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 233 NLQKLVLS 240>NP_852607 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNLQSVVLS 9 NNL+ ++LS Sbjct: 276 NNLKHLILS 284>NP_714544 Length = 1775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 741 NLQQLVLS 748>NP_001258758 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQS +LS Sbjct: 96 NLQSPILS 103>XP_006726395 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 234 NLQKLVLS 241>XP_005276181 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_005276180 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_005276179 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_006725019 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_006720470 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 53 NLQQLVLS 60>XP_006716776 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQS +LS Sbjct: 96 NLQSPILS 103>XP_006711146 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_006711145 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_006711143 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>XP_006710315 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 235 NLQKLVLS 242>NP_001010889 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLQSVVLS 9 NLQ +VLS Sbjct: 233 NLQKLVLS 240Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.118 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 291,827 Number of extensions: 460 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |