Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_660153 18 1135 XP_006717676 18 1135 XP_006717675 18 1135 XP_006717674 18 1135 XP_006717673 18 1135 XP_006717672 18 1135 XP_005269546 18 1135 XP_005269545 18 1135 XP_006717671 18 1135 XP_006717670 18 1135 XP_006717669 18 1135 XP_006717668 18 1135 XP_006717667 18 1135 NP_006720 17 4312 NP_009293 17 4312 NP_612200 16 5631 NP_056083 16 5631 XP_005247302 16 5631 NP_001239542 16 7355 NP_001239541 16 7355 NP_001014972 16 7355 NP_055312 16 7355 XP_006712053 16 7355 XP_005264320 16 7355 XP_006712052 16 7355 XP_005264319 16 7355 XP_005264318 16 7355 NP_001248319 15 9605 NP_005822 15 9605 NP_001248320 15 9605 NP_001186797 15 9605 NP_001092314 15 9605 NP_001248324 15 9605 XP_006722105 15 9605 XP_005258083 15 9605 XP_005258084 15 9605 NP_003161 15 9605 NP_006532 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NNDVRAELA 9 +NDVRAELA Sbjct: 3589 SNDVRAELA 3597>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NNDVRAELA 9 +NDVRAELA Sbjct: 3589 SNDVRAELA 3597>NP_660153 Length = 1121 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 751 NNDIRMEMA 759>XP_006717676 Length = 793 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 751 NNDIRMEMA 759>XP_006717675 Length = 877 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 751 NNDIRMEMA 759>XP_006717674 Length = 929 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 559 NNDIRMEMA 567>XP_006717673 Length = 929 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 559 NNDIRMEMA 567>XP_006717672 Length = 929 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 559 NNDIRMEMA 567>XP_005269546 Length = 929 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 559 NNDIRMEMA 567>XP_005269545 Length = 1051 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 681 NNDIRMEMA 689>XP_006717671 Length = 1091 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 751 NNDIRMEMA 759>XP_006717670 Length = 1120 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 750 NNDIRMEMA 758>XP_006717669 Length = 1120 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 750 NNDIRMEMA 758>XP_006717668 Length = 1121 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 751 NNDIRMEMA 759>XP_006717667 Length = 1121 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 NND+R E+A Sbjct: 751 NNDIRMEMA 759>NP_006720 Length = 1101 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NDVRAEL 8 ND+RAE+ Sbjct: 396 NDIRAEM 402>NP_009293 Length = 1096 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NDVRAEL 8 ND+RAE+ Sbjct: 396 NDIRAEM 402>NP_612200 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NNDVRAEL 8 +NDVRA L Sbjct: 19 SNDVRASL 26>NP_056083 Length = 2243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NNDVRAEL 8 NN RAEL Sbjct: 1645 NNSTRAEL 1652>XP_005247302 Length = 2248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NNDVRAEL 8 NN RAEL Sbjct: 1650 NNSTRAEL 1657>NP_001239542 Length = 1957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1787 DNDLKVELA 1795>NP_001239541 Length = 1978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1787 DNDLKVELA 1795>NP_001014972 Length = 1978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1787 DNDLKVELA 1795>NP_055312 Length = 1978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1787 DNDLKVELA 1795>XP_006712053 Length = 1467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1276 DNDLKVELA 1284>XP_005264320 Length = 1467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1276 DNDLKVELA 1284>XP_006712052 Length = 1467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1276 DNDLKVELA 1284>XP_005264319 Length = 2049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1893 DNDLKVELA 1901>XP_005264318 Length = 2084 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NNDVRAELA 9 +ND++ ELA Sbjct: 1893 DNDLKVELA 1901>NP_001248319 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NNDVRAEL 8 N+D++AEL Sbjct: 194 NSDMQAEL 201>NP_005822 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NNDVRAEL 8 N+D++AEL Sbjct: 170 NSDMQAEL 177>NP_001248320 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NNDVRAEL 8 N+D++AEL Sbjct: 191 NSDMQAEL 198>NP_001186797 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NDVRAELA 9 N+V AELA Sbjct: 50 NEVMAELA 57>NP_001092314 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DVRAEL 8 DVRAEL Sbjct: 232 DVRAEL 237>NP_001248324 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NNDVRAEL 8 N+D++AEL Sbjct: 98 NSDMQAEL 105>XP_006722105 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVRAELA 9 D+RAEL+ Sbjct: 1002 DIRAELS 1008>XP_005258083 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVRAELA 9 D+RAEL+ Sbjct: 1125 DIRAELS 1131>XP_005258084 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVRAELA 9 D+RAEL+ Sbjct: 1125 DIRAELS 1131>NP_003161 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVRAELA 9 D+RAEL+ Sbjct: 1125 DIRAELS 1131>NP_006532 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NDVRAELA 9 N+V AELA Sbjct: 50 NEVMAELA 57Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.122 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,438 Number of extensions: 516 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |