Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 18 1135 XP_005251512 18 1135 NP_945148 17 3301 NP_689714 17 3301 NP_945147 17 3301 NP_945146 17 3301 XP_006711254 17 3301 NP_066969 15 9605 NP_055591 15 9605 NP_631940 15 9605 NP_476511 15 9605 NP_001128686 15 9605 NP_001128685 15 9605 NP_476510 15 9605 XP_006719777 15 9605 XP_006719776 15 9605 XP_006719775 15 9605 XP_006719774 15 9605 XP_006719773 15 9605 XP_005254057 15 9605 XP_006719772 15 9605 XP_006719771 15 9605 XP_006719770 15 9605 XP_005254054 15 9605>NP_004963 Length = 1132 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 NM ALMSET Sbjct: 83 NMFALMSET 91>XP_005251512 Length = 1132 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 NM ALMSET Sbjct: 83 NMFALMSET 91>NP_945148 Length = 452 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NMSALMSE 8 NMS LMSE Sbjct: 375 NMSKLMSE 382>NP_689714 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NMSALMSE 8 NMS LMSE Sbjct: 384 NMSKLMSE 391>NP_945147 Length = 461 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NMSALMSE 8 NMS LMSE Sbjct: 384 NMSKLMSE 391>NP_945146 Length = 483 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NMSALMSE 8 NMS LMSE Sbjct: 375 NMSKLMSE 382>XP_006711254 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NMSALMSE 8 NMS LMSE Sbjct: 384 NMSKLMSE 391>NP_066969 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NMSALMSE 8 N+S+L+SE Sbjct: 58 NLSSLLSE 65>NP_055591 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>NP_631940 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>NP_476511 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>NP_001128686 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>NP_001128685 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 305 NHSALVTET 313>NP_476510 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719777 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719776 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719775 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719774 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719773 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_005254057 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 302 NHSALVTET 310>XP_006719772 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719771 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_006719770 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 303 NHSALVTET 311>XP_005254054 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMSALMSET 9 N SAL++ET Sbjct: 302 NHSALVTET 310Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.100 0.223 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 212,476 Number of extensions: 231 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |