Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_940820 17 2528 NP_001028776 17 2528 NP_001028777 17 2528 NP_055266 17 2528 XP_006715751 17 2528 XP_005249757 17 2528 XP_006715750 17 2528 NP_005711 17 3301 XP_006715889 17 3301 XP_006715888 17 3301 NP_001265611 17 4312 NP_775299 17 4312 NP_003235 17 4312 NP_775303 17 4312 NP_775302 17 4312 NP_775301 17 4312 NP_001265615 17 4312 NP_777480 17 4312 NP_733796 17 4312 NP_001265613 17 4312 NP_775300 17 4312 NP_004923 17 4312 NP_057363 17 4312 XP_005258192 17 4312 NP_060682 16 5631 NP_001008493 16 5631 XP_005273239 16 5631 XP_005273246 16 5631 XP_005273245 16 5631 XP_006711860 16 5631 XP_006711859 16 5631 XP_005273244 16 5631 XP_006711858 16 5631 XP_006711856 16 5631 XP_006711855 16 5631 XP_006711854 16 5631 XP_006711853 16 5631 XP_006711852 16 5631 XP_006711851 16 5631 XP_006711850 16 5631 XP_006711849 16 5631 NP_065988 16 7355 NP_005235 16 7355 NP_742108 16 7355 NP_001185780 16 7355 NP_001185779 16 7355 NP_001185781 16 7355 NP_055762 16 7355 NP_057302 16 7355 XP_005267986 16 7355 XP_006714715 16 7355 XP_006714714 16 7355 XP_006714713 16 7355 XP_005248591 16 7355 XP_006710522 16 7355 XP_006710521 16 7355 XP_005270689 16 7355 NP_277045 15 9605 NP_001004470 15 9605 NP_060639 15 9605 XP_006719162 15 9605 XP_005253462 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 2586 NVPKQSSQL 2594>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 1238 NVPKQSSQL 1246>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 2238 NVPKQSSQL 2246>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 2580 NVPKQSSQL 2588>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 2586 NVPKQSSQL 2594>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 2586 NVPKQSSQL 2594>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NMPKQSSQL 9 N+PKQSSQL Sbjct: 2586 NVPKQSSQL 2594>NP_940820 Length = 887 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 800 NIPKDTSQL 808>NP_001028776 Length = 852 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 765 NIPKDTSQL 773>NP_001028777 Length = 882 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 795 NIPKDTSQL 803>NP_055266 Length = 847 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 760 NIPKDTSQL 768>XP_006715751 Length = 796 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 709 NIPKDTSQL 717>XP_005249757 Length = 886 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 800 NIPKDTSQL 808>XP_006715750 Length = 887 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK +SQL Sbjct: 800 NIPKDTSQL 808>NP_005711 Length = 372 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NMPKQSSQ 8 ++PKQSSQ Sbjct: 286 DVPKQSSQ 293>XP_006715889 Length = 372 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NMPKQSSQ 8 ++PKQSSQ Sbjct: 286 DVPKQSSQ 293>XP_006715888 Length = 372 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NMPKQSSQ 8 ++PKQSSQ Sbjct: 286 DVPKQSSQ 293>NP_001265611 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 44 NLPKESVQI 52>NP_775299 Length = 286 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 55 NLPKESVQI 63>NP_003235 Length = 272 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 41 NLPKESVQI 49>NP_775303 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 21 NLPKESVQI 29>NP_775302 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 21 NLPKESVQI 29>NP_775301 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 21 NLPKESVQI 29>NP_001265615 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 21 NLPKESVQI 29>NP_777480 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 21 NLPKESVQI 29>NP_733796 Length = 401 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 170 NLPKESVQI 178>NP_001265613 Length = 272 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 41 NLPKESVQI 49>NP_775300 Length = 272 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 41 NLPKESVQI 49>NP_004923 Length = 790 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N PKQSS++ Sbjct: 464 NNPKQSSRV 472>NP_057363 Length = 789 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NMPKQSSQL 9 N PKQSS + Sbjct: 464 NNPKQSSHI 472>XP_005258192 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMPKQSSQL 9 N+PK+S Q+ Sbjct: 21 NLPKESVQI 29>NP_060682 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 120 LPRQNSQL 127>NP_001008493 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 120 LPRQNSQL 127>XP_005273239 Length = 812 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 134 LPRQNSQL 141>XP_005273246 Length = 547 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 134 LPRQNSQL 141>XP_005273245 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 134 LPRQNSQL 141>XP_006711860 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 153 LPRQNSQL 160>XP_006711859 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 153 LPRQNSQL 160>XP_005273244 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 134 LPRQNSQL 141>XP_006711858 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 153 LPRQNSQL 160>XP_006711856 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 107 LPRQNSQL 114>XP_006711855 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 107 LPRQNSQL 114>XP_006711854 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 120 LPRQNSQL 127>XP_006711853 Length = 825 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 126 LPRQNSQL 133>XP_006711852 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 153 LPRQNSQL 160>XP_006711851 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 134 LPRQNSQL 141>XP_006711850 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 139 LPRQNSQL 146>XP_006711849 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MPKQSSQL 9 +P+Q+SQL Sbjct: 153 LPRQNSQL 160>NP_065988 Length = 2048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NMPKQSSQL 9 N PK SQL Sbjct: 1473 NFPKPCSQL 1481>NP_005235 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P QSS+ Sbjct: 210 NVPNQSSE 217>NP_742108 Length = 459 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P QSS+ Sbjct: 210 NVPNQSSE 217>NP_001185780 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 315 NIPSESSQ 322>NP_001185779 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 315 NIPSESSQ 322>NP_001185781 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 281 NIPSESSQ 288>NP_055762 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 315 NIPSESSQ 322>NP_057302 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N PK+SS+ Sbjct: 819 NQPKESSR 826>XP_005267986 Length = 2022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NMPKQSSQL 9 N PK SQL Sbjct: 1447 NFPKPCSQL 1455>XP_006714715 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N PK+SS+ Sbjct: 404 NQPKESSR 411>XP_006714714 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N PK+SS+ Sbjct: 743 NQPKESSR 750>XP_006714713 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N PK+SS+ Sbjct: 833 NQPKESSR 840>XP_005248591 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N PK+SS+ Sbjct: 833 NQPKESSR 840>XP_006710522 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 289 NIPSESSQ 296>XP_006710521 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 300 NIPSESSQ 307>XP_005270689 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMPKQSSQ 8 N+P +SSQ Sbjct: 323 NIPSESSQ 330>NP_277045 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MPKQSSQL 9 MPK SQL Sbjct: 157 MPKSYSQL 164>NP_001004470 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MPKQSSQL 9 MPK+ SQ+ Sbjct: 372 MPKEYSQI 379>NP_060639 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NMPKQSSQL 9 NMP SQL Sbjct: 148 NMPALQSQL 156>XP_006719162 Length = 1676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NMPKQSSQL 9 NMP SQL Sbjct: 148 NMPALQSQL 156>XP_005253462 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NMPKQSSQL 9 NMP SQL Sbjct: 148 NMPALQSQL 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.108 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 537,105 Number of extensions: 482 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |