Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 NP_001092882 20 299 NP_006757 20 299 NP_001092883 20 299 XP_005269721 20 299 XP_005273706 20 299 NP_078966 16 5631 NP_056432 16 5631 XP_005254357 16 5631 NP_002567 16 7355 NP_001122092 16 7355 NP_006097 16 7355 NP_001269028 16 7355 NP_115954 16 7355 NP_001269026 16 7355 NP_001269027 16 7355 NP_055840 16 7355 NP_000258 16 7355 NP_001035957 16 7355 XP_006721990 16 7355 XP_006721989 16 7355 XP_005258041 16 7355 XP_006721988 16 7355 XP_006721987 16 7355 XP_006721986 16 7355 XP_005258040 16 7355 XP_006721985 16 7355 XP_006718639 16 7355 XP_006718638 16 7355 XP_006718637 16 7355 XP_006718636 16 7355 XP_005274082 16 7355 XP_006718635 16 7355 XP_006711931 16 7355 XP_006711930 16 7355 XP_006711929 16 7355 XP_006711928 16 7355 XP_006711927 16 7355 XP_006711926 16 7355 XP_006711925 16 7355 NP_003292 15 9605 NP_001106853 15 9605 XP_006712889 15 9605 NP_803875 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1693 NMNTLNAMN 1701>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1985 NMNTLNAMN 1993>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1802 NMNTLNAMN 1810>NP_001092882 Length = 2004 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1915 NMNTLNAMN 1923>NP_006757 Length = 2004 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1915 NMNTLNAMN 1923>NP_001092883 Length = 2004 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1915 NMNTLNAMN 1923>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1985 NMNTLNAMN 1993>XP_005273706 Length = 1997 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NMNT NAMN Sbjct: 1908 NMNTLNAMN 1916>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 NM T+N+M+ Sbjct: 6015 NMGTTNSMH 6023>NP_056432 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 N+N +NA+N Sbjct: 275 NVNRNNAVN 283>XP_005254357 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NMNTSNAMN 9 N+N +NA+N Sbjct: 275 NVNRNNAVN 283>NP_002567 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>NP_001122092 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>NP_006097 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MNTSNAMN 9 MN+++AMN Sbjct: 225 MNSASAMN 232>NP_001269028 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MNTSNAMN 9 MN+++AMN Sbjct: 225 MNSASAMN 232>NP_115954 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NMNTSN 6 N+NTSN Sbjct: 156 NLNTSN 161>NP_001269026 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MNTSNAMN 9 MN+++AMN Sbjct: 225 MNSASAMN 232>NP_001269027 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MNTSNAMN 9 MN+++AMN Sbjct: 225 MNSASAMN 232>NP_055840 Length = 1184 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>NP_000258 Length = 2818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2754 NLNLSNSM 2761>NP_001035957 Length = 2839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2775 NLNLSNSM 2782>XP_006721990 Length = 2823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2785 NLNLSNSM 2792>XP_006721989 Length = 2823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2785 NLNLSNSM 2792>XP_005258041 Length = 2836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2754 NLNLSNSM 2761>XP_006721988 Length = 2846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2764 NLNLSNSM 2771>XP_006721987 Length = 2849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2785 NLNLSNSM 2792>XP_006721986 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2772 NLNLSNSM 2779>XP_005258040 Length = 2857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2775 NLNLSNSM 2782>XP_006721985 Length = 2867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N+N SN+M Sbjct: 2785 NLNLSNSM 2792>XP_006718639 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>XP_006718638 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>XP_006718637 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>XP_006718636 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>XP_005274082 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 154 NSSNALN 160>XP_006718635 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTSNAMN 9 N+SNA+N Sbjct: 216 NSSNALN 222>XP_006711931 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>XP_006711930 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>XP_006711929 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>XP_006711928 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>XP_006711927 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>XP_006711926 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>XP_006711925 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NMNTSNAM 8 N NTSN++ Sbjct: 226 NSNTSNSL 233>NP_003292 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NMNTSN 6 N+NTSN Sbjct: 246 NVNTSN 251>NP_001106853 Length = 2093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NMNTSNA 7 ++NTSNA Sbjct: 2045 SLNTSNA 2051>XP_006712889 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NMNTSNA 7 ++NTSNA Sbjct: 2021 SLNTSNA 2027>NP_803875 Length = 4243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NMNTSNAMN 9 N T+NA+N Sbjct: 517 NWETTNAIN 525Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.0966 0.244 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,359 Number of extensions: 686 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |