Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001185761                                                           19     665
NP_001185763                                                           19     665
NP_055459                                                              19     665
XP_006726412                                                           19     665
XP_006726410                                                           19     665
XP_006711760                                                           19     665
XP_006711719                                                           19     665
XP_006711718                                                           19     665
XP_006711717                                                           19     665
XP_006711716                                                           19     665
XP_006711715                                                           19     665
XP_006711714                                                           19     665
XP_006711713                                                           19     665
XP_006711711                                                           19     665
XP_006711710                                                           19     665
XP_006711709                                                           19     665
XP_005277503                                                           19     665
XP_005273038                                                           19     665
XP_005277500                                                           19     665
XP_006711707                                                           19     665
XP_005277499                                                           19     665
XP_006711706                                                           19     665
XP_006711705                                                           19     665
XP_006711164                                                           19     665
XP_005276153                                                           19     665
XP_003846805                                                           19     665
NP_742013                                                              17    4312
NP_067076                                                              17    4312
NP_001186048                                                           17    4312
NP_000293                                                              16    5631
NP_000688                                                              16    5631
NP_002811                                                              16    5631
NP_945317                                                              16    5631
NP_945316                                                              16    5631
NP_945315                                                              16    5631
NP_473373                                                              16    5631
NP_115666                                                              16    5631
XP_006721560                                                           16    5631
XP_006721559                                                           16    5631
XP_005256645                                                           16    5631
XP_005253491                                                           16    5631
XP_006719178                                                           16    5631
XP_005272170                                                           16    5631
NP_005751                                                              16    7355
NP_001034704                                                           16    7355
NP_001180559                                                           16    7355
NP_775810                                                              16    7355
NP_001035881                                                           16    7355
NP_001274185                                                           16    7355
NP_001274184                                                           16    7355
NP_001274183                                                           16    7355
NP_001035880                                                           16    7355
NP_001157929                                                           16    7355
NP_001265642                                                           16    7355
XP_006725125                                                           16    7355
XP_006716299                                                           16    7355
XP_006716293                                                           16    7355
NP_001004328                                                           16    7355
NP_001135768                                                           15    9605
NP_001135766                                                           15    9605
NP_001135767                                                           15    9605
NP_055902                                                              15    9605
NP_001089                                                              15    9605
NP_001127945                                                           15    9605
NP_940853                                                              15    9605
NP_078788                                                              15    9605
NP_001265113                                                           15    9605
NP_055430                                                              15    9605
NP_055318                                                              15    9605
NP_060557                                                              15    9605
XP_005255922                                                           15    9605
XP_006721236                                                           15    9605
XP_006721235                                                           15    9605
XP_005255921                                                           15    9605
XP_005255920                                                           15    9605
XP_005255919                                                           15    9605
XP_005255918                                                           15    9605
XP_005255917                                                           15    9605
XP_005255916                                                           15    9605
XP_006720320                                                           15    9605
XP_005268130                                                           15    9605
XP_005266373                                                           15    9605
XP_005266372                                                           15    9605
XP_005266374                                                           15    9605
XP_005266370                                                           15    9605
XP_005266371                                                           15    9605
XP_006719406                                                           15    9605
XP_006713395                                                           15    9605
XP_006710825                                                           15    9605
NP_001162023                                                           15    9605
NP_001139669                                                           15    9605
NP_997545                                                              15    9605
>NP_001185761
          Length = 2240

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 1937 DLSHLVAEV 1945
>NP_001185763
          Length = 2362

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2043 DLSHLVAEV 2051
>NP_055459
          Length = 2346

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2043 DLSHLVAEV 2051
>XP_006726412
          Length = 140

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   NLSHLVAEV 9
           +LSHLVAEV
Sbjct: 115 DLSHLVAEV 123
>XP_006726410
          Length = 2087

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 1784 DLSHLVAEV 1792
>XP_006711760
          Length = 140

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   NLSHLVAEV 9
           +LSHLVAEV
Sbjct: 115 DLSHLVAEV 123
>XP_006711719
          Length = 2302

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 1999 DLSHLVAEV 2007
>XP_006711718
          Length = 1436

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 1050 DLSHLVAEV 1058
>XP_006711717
          Length = 2385

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 1999 DLSHLVAEV 2007
>XP_006711716
          Length = 2411

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2108 DLSHLVAEV 2116
>XP_006711715
          Length = 2428

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2042 DLSHLVAEV 2050
>XP_006711714
          Length = 2429

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2043 DLSHLVAEV 2051
>XP_006711713
          Length = 2432

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2046 DLSHLVAEV 2054
>XP_006711711
          Length = 2482

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2096 DLSHLVAEV 2104
>XP_006711710
          Length = 2494

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2108 DLSHLVAEV 2116
>XP_006711709
          Length = 2495

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2109 DLSHLVAEV 2117
>XP_005277503
          Length = 2498

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2206 DLSHLVAEV 2214
>XP_005273038
          Length = 2509

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2206 DLSHLVAEV 2214
>XP_005277500
          Length = 2525

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2206 DLSHLVAEV 2214
>XP_006711707
          Length = 2553

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2206 DLSHLVAEV 2214
>XP_005277499
          Length = 2561

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2206 DLSHLVAEV 2214
>XP_006711706
          Length = 2591

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2205 DLSHLVAEV 2213
>XP_006711705
          Length = 2592

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 2206 DLSHLVAEV 2214
>XP_006711164
          Length = 2087

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    NLSHLVAEV 9
            +LSHLVAEV
Sbjct: 1784 DLSHLVAEV 1792
>XP_005276153
          Length = 267

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  NLSHLVAEV 9
          +LSHLVAEV
Sbjct: 39 DLSHLVAEV 47
>XP_003846805
          Length = 306

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  NLSHLVAEV 9
          +LSHLVAEV
Sbjct: 39 DLSHLVAEV 47
>NP_742013
          Length = 488

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NLSHLVAEV 9
           +L+HL AEV
Sbjct: 239 DLAHLAAEV 247
>NP_067076
          Length = 518

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NLSHLVAEV 9
           +L+HL AEV
Sbjct: 239 DLAHLAAEV 247
>NP_001186048
          Length = 503

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NLSHLVAEV 9
           +L+HL AEV
Sbjct: 239 DLAHLAAEV 247
>NP_000293
          Length = 727

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   NLSHLVAE 8
           NLS LVAE
Sbjct: 163 NLSKLVAE 170
>NP_000688
          Length = 663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SHLVAEV 9
           +HLVAEV
Sbjct: 364 THLVAEV 370
>NP_002811
          Length = 175

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  LSHLVAEV 9
          L HL+AE+
Sbjct: 60 LHHLIAEI 67
>NP_945317
          Length = 177

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  LSHLVAEV 9
          L HL+AE+
Sbjct: 60 LHHLIAEI 67
>NP_945316
          Length = 177

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  LSHLVAEV 9
          L HL+AE+
Sbjct: 60 LHHLIAEI 67
>NP_945315
          Length = 175

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  LSHLVAEV 9
          L HL+AE+
Sbjct: 60 LHHLIAEI 67
>NP_473373
          Length = 322

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  NLSHLVAEV 9
          N+SHL+ ++
Sbjct: 89 NISHLIRKI 97
>NP_115666
          Length = 1058

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  NLSHLVAE 8
          N +HL+AE
Sbjct: 42 NCTHLIAE 49
>XP_006721560
          Length = 479

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SHLVAEV 9
           +HLVAEV
Sbjct: 180 THLVAEV 186
>XP_006721559
          Length = 500

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SHLVAEV 9
           +HLVAEV
Sbjct: 201 THLVAEV 207
>XP_005256645
          Length = 541

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SHLVAEV 9
           +HLVAEV
Sbjct: 242 THLVAEV 248
>XP_005253491
          Length = 159

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  LSHLVAEV 9
          L HL+AE+
Sbjct: 60 LHHLIAEI 67
>XP_006719178
          Length = 177

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  LSHLVAEV 9
          L HL+AE+
Sbjct: 60 LHHLIAEI 67
>XP_005272170
          Length = 1058

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  NLSHLVAE 8
          N +HL+AE
Sbjct: 42 NCTHLIAE 49
>NP_005751
          Length = 1054

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LSHLVAE 8
           L HLVAE
Sbjct: 339 LKHLVAE 345
>NP_001034704
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001180559
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_775810
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001035881
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001274185
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001274184
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001274183
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001035880
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001157929
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001265642
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>XP_006725125
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>XP_006716299
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>XP_006716293
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001004328
          Length = 300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  NLSHLVA 7
          N+SHLV+
Sbjct: 39 NISHLVS 45
>NP_001135768
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>NP_001135766
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>NP_001135767
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>NP_055902
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>NP_001089
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NLSHLVAEV 9
           +L+H VAEV
Sbjct: 356 DLAHPVAEV 364
>NP_001127945
          Length = 1113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1064 LSHSVAEL 1071
>NP_940853
          Length = 311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   NLSHLVA 7
           N SHL+A
Sbjct: 196 NCSHLIA 202
>NP_078788
          Length = 371

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   LSHLVAEV 9
           +SHL AE+
Sbjct: 156 ISHLPAEI 163
>NP_001265113
          Length = 1144

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1095 LSHSVAEL 1102
>NP_055430
          Length = 1217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1168 LSHSVAEL 1175
>NP_055318
          Length = 2785

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    NLSHLVA 7
            N+SHL++
Sbjct: 1107 NISHLIS 1113
>NP_060557
          Length = 674

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   LSHLVA 7
           LSHLVA
Sbjct: 568 LSHLVA 573
>XP_005255922
          Length = 1154

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1105 LSHSVAEL 1112
>XP_006721236
          Length = 1214

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1165 LSHSVAEL 1172
>XP_006721235
          Length = 1214

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1165 LSHSVAEL 1172
>XP_005255921
          Length = 1227

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1178 LSHSVAEL 1185
>XP_005255920
          Length = 1229

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1180 LSHSVAEL 1187
>XP_005255919
          Length = 1860

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1811 LSHSVAEL 1818
>XP_005255918
          Length = 1949

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1900 LSHSVAEL 1907
>XP_005255917
          Length = 1984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1935 LSHSVAEL 1942
>XP_005255916
          Length = 2022

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LSHLVAEV 9
            LSH VAE+
Sbjct: 1973 LSHSVAEL 1980
>XP_006720320
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  NLSHLVAEV 9
          N+SHL+ ++
Sbjct: 38 NISHLLRKI 46
>XP_005268130
          Length = 438

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  NLSHLVAEV 9
          N+SHL+ ++
Sbjct: 38 NISHLLRKI 46
>XP_005266373
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>XP_005266372
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>XP_005266374
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>XP_005266370
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>XP_005266371
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   NLSHLV 6
           NLSH+V
Sbjct: 398 NLSHIV 403
>XP_006719406
          Length = 2380

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    NLSHLVA 7
            N+SHL++
Sbjct: 1107 NISHLIS 1113
>XP_006713395
          Length = 219

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   LSHLVAEV 9
           +SHL AE+
Sbjct: 156 ISHLPAEI 163
>XP_006710825
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   LSHLVA 7
           LSHLVA
Sbjct: 563 LSHLVA 568
>NP_001162023
          Length = 634

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   LSHLVA 7
           LSHLVA
Sbjct: 528 LSHLVA 533
>NP_001139669
          Length = 7081

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    NLSHLV 6
            NLSH+V
Sbjct: 2033 NLSHIV 2038
>NP_997545
          Length = 306

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  NLSHLVAEV 9
          N+SHL+ ++
Sbjct: 38 NISHLLRKI 46
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.315    0.127    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 510,945
Number of extensions: 770
Number of successful extensions: 92
Number of sequences better than 10000.0: 92
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 92
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)

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