Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001254726 17 3301 NP_055630 17 3301 XP_005257931 17 3301 XP_005257930 17 3301 XP_005257929 17 3301 XP_006722270 17 3301 XP_006722269 17 3301 XP_005257928 17 3301 XP_006722268 17 3301 XP_005257927 17 3301 XP_006722267 17 3301 XP_006722266 17 3301 NP_001072986 17 3301 NP_001007215 17 4312 NP_055227 17 4312 NP_001180263 17 4312 NP_001002292 17 4312 NP_659483 17 4312 NP_079187 17 4312 XP_005245149 17 4312 NP_001253981 16 5631 XP_005257983 16 5631 XP_005256679 16 5631 NP_001108446 16 5631 NP_775259 16 5631 NP_001028748 16 5631 NP_001177203 16 7355 NP_079409 16 7355 NP_066958 16 7355 NP_001006933 16 7355 NP_001035282 16 7355 NP_060303 16 7355 XP_006725461 16 7355 XP_006724090 16 7355 XP_005267149 16 7355 XP_006715612 16 7355 XP_005264631 16 7355 XP_005264630 16 7355 XP_005264629 16 7355 NP_006845 15 9605 NP_001094073 15 9605 NP_653299 15 9605 NP_057839 15 9605 NP_001267728 15 9605 NP_006846 15 9605 NP_002431 15 9605 NP_006792 15 9605 NP_690607 15 9605 NP_004972 15 9605 NP_001004740 15 9605>NP_001254726 Length = 976 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 242 NLTGETQSL 250>NP_055630 Length = 989 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 255 NLTGETQSL 263>XP_005257931 Length = 1014 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 280 NLTGETQSL 288>XP_005257930 Length = 1032 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 299 NLTGETQSL 307>XP_005257929 Length = 1033 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 299 NLTGETQSL 307>XP_006722270 Length = 1044 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 255 NLTGETQSL 263>XP_006722269 Length = 1044 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 255 NLTGETQSL 263>XP_005257928 Length = 1051 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 274 NLTGETQSL 282>XP_006722268 Length = 1051 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 274 NLTGETQSL 282>XP_005257927 Length = 1057 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 280 NLTGETQSL 288>XP_006722267 Length = 1069 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 280 NLTGETQSL 288>XP_006722266 Length = 1076 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 299 NLTGETQSL 307>NP_001072986 Length = 976 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NLSGKSQSL 9 NL+G++QSL Sbjct: 242 NLTGETQSL 250>NP_001007215 Length = 185 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLSGKSQSL 9 NL+GKS S+ Sbjct: 76 NLNGKSYSM 84>NP_055227 Length = 228 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLSGKSQSL 9 NL+GKS S+ Sbjct: 119 NLNGKSYSM 127>NP_001180263 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 N+SGK SL Sbjct: 315 NISGKQSSL 323>NP_001002292 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 N+SGK SL Sbjct: 404 NISGKQSSL 412>NP_659483 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLSGKSQ 7 NL+GKSQ Sbjct: 121 NLNGKSQ 127>NP_079187 Length = 541 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 N+SGK SL Sbjct: 406 NISGKQSSL 414>XP_005245149 Length = 185 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLSGKSQSL 9 NL+GKS S+ Sbjct: 76 NLNGKSYSM 84>NP_001253981 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSG+S L Sbjct: 743 NLSGRSDKL 751>XP_005257983 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSG+S L Sbjct: 664 NLSGRSDKL 672>XP_005256679 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLSGKSQSL 9 +LSG+ QSL Sbjct: 127 SLSGRGQSL 135>NP_001108446 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLSGKSQSL 9 +LSG+ QSL Sbjct: 127 SLSGRGQSL 135>NP_775259 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSG+S L Sbjct: 745 NLSGRSDKL 753>NP_001028748 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSG+S L Sbjct: 743 NLSGRSDKL 751>NP_001177203 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 139 VSGKSQDL 146>NP_079409 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 55 VSGKSQDL 62>NP_066958 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSGKSQSL 9 LSG++QSL Sbjct: 282 LSGEAQSL 289>NP_001006933 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSGKSQSL 9 LSG++QSL Sbjct: 290 LSGEAQSL 297>NP_001035282 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSGK + L Sbjct: 219 NLSGKGKPL 227>NP_060303 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSGK + L Sbjct: 219 NLSGKGKPL 227>XP_006725461 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSGK + L Sbjct: 219 NLSGKGKPL 227>XP_006724090 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 NLSGK + L Sbjct: 219 NLSGKGKPL 227>XP_005267149 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSGKSQSL 9 LSG++QSL Sbjct: 307 LSGEAQSL 314>XP_006715612 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSGKSQSL 9 LSG++QSL Sbjct: 310 LSGEAQSL 317>XP_005264631 Length = 926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 139 VSGKSQDL 146>XP_005264630 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 139 VSGKSQDL 146>XP_005264629 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 139 VSGKSQDL 146>NP_006845 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 32 ISGKSQLL 39>NP_001094073 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 32 ISGKSQLL 39>NP_653299 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ + Sbjct: 800 MSGKSQEI 807>NP_057839 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 32 ISGKSQIL 39>NP_001267728 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ + Sbjct: 710 MSGKSQEI 717>NP_006846 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 32 ISGKSQIL 39>NP_002431 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSGKSQSL 9 N+SGKS L Sbjct: 682 NMSGKSTYL 690>NP_006792 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 +SGKSQ L Sbjct: 32 ISGKSQVL 39>NP_690607 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NLSGKSQ 7 NLS KSQ Sbjct: 34 NLSNKSQ 40>NP_004972 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NLSGKSQ 7 NLS KSQ Sbjct: 34 NLSNKSQ 40>NP_001004740 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSGKSQSL 9 LSG SQSL Sbjct: 154 LSGFSQSL 161Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.110 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,848 Number of extensions: 483 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |