Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_079082 18 1482 XP_005271738 18 1482 XP_006718978 18 1482 XP_005271736 18 1482 XP_005271737 18 1482 NP_006056 17 4312 XP_005260701 17 4312 XP_005260700 17 4312 XP_005260698 17 4312 XP_006710313 17 4312 NP_001139669 17 4312 NP_001077379 17 4312 NP_001265436 16 5631 NP_001139131 16 5631 NP_001008747 16 5631 NP_940897 16 5631 NP_848656 16 5631 NP_001180210 16 7355 NP_001092094 16 7355 NP_000372 16 7355 NP_150632 16 7355 NP_001180206 16 7355 NP_001180209 16 7355 NP_001180207 16 7355 NP_150631 16 7355 NP_001180208 16 7355 NP_079133 16 7355 NP_438112 16 7355 NP_036348 16 7355 NP_001005191 16 7355 NP_004883 16 7355 XP_005262119 16 7355 XP_005274595 16 7355 XP_006724556 16 7355 XP_005274594 16 7355 XP_005274593 16 7355 XP_006724555 16 7355 XP_006716433 16 7355 XP_005273633 16 7355 XP_006716432 16 7355 XP_005273632 16 7355 NP_112561 16 7355 NP_570124 15 9605 NP_000634 15 9605 NP_000635 15 9605 NP_000636 15 9605 NP_000019 15 9605 NP_000637 15 9605 NP_000633 15 9605 NP_004085 15 9605 NP_001155003 15 9605 NP_001155002 15 9605 NP_001155001 15 9605 NP_758452 15 9605 NP_758449 15 9605 NP_001274742 15 9605 NP_001155004 15 9605 NP_001274743 15 9605 NP_061840 15 9605 XP_006726478 15 9605 XP_006724925 15 9605 XP_006724924 15 9605 XP_006724923 15 9605 XP_006724922 15 9605 XP_006724921 15 9605 XP_006724504 15 9605 XP_006724503 15 9605 XP_006724502 15 9605 XP_006724501 15 9605 XP_006724500 15 9605 XP_006716519 15 9605 XP_006715913 15 9605 XP_006714496 15 9605 XP_005270614 15 9605 XP_006710224 15 9605 NP_758450 15 9605 NP_006131 15 9605 NP_758448 15 9605>NP_079082 Length = 778 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 NLSELSKRN 9 NL+ELSKR+ Sbjct: 495 NLNELSKRH 503>XP_005271738 Length = 714 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 NLSELSKRN 9 NL+ELSKR+ Sbjct: 495 NLNELSKRH 503>XP_006718978 Length = 740 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 NLSELSKRN 9 NL+ELSKR+ Sbjct: 457 NLNELSKRH 465>XP_005271736 Length = 778 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 NLSELSKRN 9 NL+ELSKR+ Sbjct: 495 NLNELSKRH 503>XP_005271737 Length = 778 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 NLSELSKRN 9 NL+ELSKR+ Sbjct: 495 NLNELSKRH 503>NP_006056 Length = 398 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSELSKRN 9 +SEL+KRN Sbjct: 92 VSELTKRN 99>XP_005260701 Length = 180 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSELSKRN 9 +SEL+KRN Sbjct: 91 VSELTKRN 98>XP_005260700 Length = 286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSELSKRN 9 +SEL+KRN Sbjct: 91 VSELTKRN 98>XP_005260698 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSELSKRN 9 +SEL+KRN Sbjct: 91 VSELTKRN 98>XP_006710313 Length = 160 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSELSKRN 9 +SEL+KRN Sbjct: 75 VSELTKRN 82>NP_001139669 Length = 7081 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLSELSKRN 9 N SE+SKR+ Sbjct: 6180 NTSEMSKRD 6188>NP_001077379 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSELSKRN 9 +SEL+KRN Sbjct: 92 VSELTKRN 99>NP_001265436 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS+L K N Sbjct: 475 NLSDLRKEN 483>NP_001139131 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS+L K N Sbjct: 475 NLSDLRKEN 483>NP_001008747 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS+L K N Sbjct: 475 NLSDLRKEN 483>NP_940897 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS+L K N Sbjct: 475 NLSDLRKEN 483>NP_848656 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS+L K N Sbjct: 475 NLSDLRKEN 483>NP_001180210 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 188 NLTNLIKRN 196>NP_001092094 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>NP_000372 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>NP_150632 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>NP_001180206 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>NP_001180209 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 188 NLTNLIKRN 196>NP_001180207 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>NP_150631 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 188 NLTNLIKRN 196>NP_001180208 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>NP_079133 Length = 1844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ELSKRN 9 ELSKRN Sbjct: 1029 ELSKRN 1034>NP_438112 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 246 NLTNLVKRN 254>NP_036348 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 246 NLTNLVKRN 254>NP_001005191 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLSELSK 7 NL+ELSK Sbjct: 5 NLTELSK 11>NP_004883 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLSELSKR 8 NLS LSK+ Sbjct: 172 NLSSLSKK 179>XP_005262119 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLVKRN 234>XP_005274595 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>XP_006724556 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 188 NLTNLIKRN 196>XP_005274594 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>XP_005274593 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>XP_006724555 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ L KRN Sbjct: 226 NLTNLIKRN 234>XP_006716433 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ + KRN Sbjct: 2711 NLNSMKKRN 2719>XP_005273633 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ + KRN Sbjct: 2711 NLNSMKKRN 2719>XP_006716432 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ + KRN Sbjct: 2814 NLNSMKKRN 2822>XP_005273632 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ + KRN Sbjct: 2814 NLNSMKKRN 2822>NP_112561 Length = 2789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ + KRN Sbjct: 2431 NLNSMKKRN 2439>NP_570124 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SELSKRN 9 SE++KRN Sbjct: 219 SEIAKRN 225>NP_000634 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_000635 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_000636 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1280 LLELSKKN 1287>NP_000019 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_000637 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1281 LLELSKKN 1288>NP_000633 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_004085 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSELSKR 8 LSELS+R Sbjct: 48 LSELSRR 54>NP_001155003 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_001155002 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_001155001 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_758452 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_758449 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_001274742 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 N+S L+K N Sbjct: 262 NISNLTKHN 270>NP_001155004 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 49 NLSGLTSRN 57>NP_001274743 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 N+S L+K N Sbjct: 262 NISNLTKHN 270>NP_061840 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 N+S L+K N Sbjct: 262 NISNLTKHN 270>XP_006726478 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ LSK N Sbjct: 27 NLTPLSKAN 35>XP_006724925 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724924 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724923 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724922 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 255 NLSGLTSRN 263>XP_006724921 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724504 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724503 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724502 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006724501 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 255 NLSGLTSRN 263>XP_006724500 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 263 NLSGLTSRN 271>XP_006716519 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 N+S L+K N Sbjct: 262 NISNLTKHN 270>XP_006715913 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SELSKRN 9 SE++KRN Sbjct: 11 SEIAKRN 17>XP_006714496 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ LSK N Sbjct: 27 NLTPLSKAN 35>XP_005270614 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSELSKRN 9 L ELSK+N Sbjct: 1297 LLELSKKN 1304>XP_006710224 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NL+ LSK N Sbjct: 27 NLTPLSKAN 35>NP_758450 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_006131 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190>NP_758448 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLSELSKRN 9 NLS L+ RN Sbjct: 182 NLSGLTSRN 190Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.114 0.265 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 357,906 Number of extensions: 590 Number of successful extensions: 78 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |