Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001162597 18 1935 NP_653216 18 1935 NP_072088 17 3301 NP_001273596 16 7355 NP_001273595 16 7355 NP_001273594 16 7355 NP_001129406 16 7355 NP_001129407 16 7355 NP_006466 16 7355 NP_001129408 16 7355 NP_001266282 16 7355 NP_919255 16 7355 NP_001266284 16 7355 NP_009190 16 7355 NP_001266283 16 7355 XP_005255358 16 7355 XP_005255357 16 7355 XP_005255356 16 7355 XP_005255355 16 7355 XP_005266289 16 7355 XP_005266288 16 7355 XP_006719746 16 7355 XP_005253685 16 7355 XP_005253684 16 7355 XP_006711205 16 7355 NP_001138483 16 7355 NP_003950 16 7355 NP_060791 16 7355 NP_001034930 15 9605 NP_079124 15 9605 NP_001273409 15 9605 NP_055598 15 9605 NP_002635 15 9605 NP_619520 15 9605 NP_055781 15 9605 NP_055918 15 9605 NP_955389 15 9605 NP_001273408 15 9605 XP_006725628 15 9605 XP_006725627 15 9605 XP_006720851 15 9605 XP_005254865 15 9605 XP_006713096 15 9605 XP_006713095 15 9605 XP_005273220 15 9605 XP_005244856 15 9605 XP_006710969 15 9605 XP_005244855 15 9605>NP_001162597 Length = 278 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 NLL+V QGS Sbjct: 30 NLLQVRQGS 38>NP_653216 Length = 282 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 NLL+V QGS Sbjct: 30 NLLQVRQGS 38>NP_072088 Length = 362 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LLEVSQG 8 LLEVSQG Sbjct: 180 LLEVSQG 186>NP_001273596 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_001273595 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_001273594 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_001129406 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_001129407 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_006466 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_001129408 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>NP_001266282 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLLEVSQ 7 NLLEVS+ Sbjct: 241 NLLEVSE 247>NP_919255 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLEVSQGS 9 LLE+++GS Sbjct: 60 LLEITEGS 67>NP_001266284 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLLEVSQ 7 NLLEVS+ Sbjct: 223 NLLEVSE 229>NP_009190 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLLEVSQ 7 NLLEVS+ Sbjct: 346 NLLEVSE 352>NP_001266283 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLLEVSQ 7 NLLEVS+ Sbjct: 310 NLLEVSE 316>XP_005255358 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLEVSQGS 9 LLE SQG+ Sbjct: 107 LLEASQGT 114>XP_005255357 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLEVSQGS 9 LLE SQG+ Sbjct: 107 LLEASQGT 114>XP_005255356 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLEVSQGS 9 LLE SQG+ Sbjct: 107 LLEASQGT 114>XP_005255355 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLEVSQGS 9 LLE SQG+ Sbjct: 107 LLEASQGT 114>XP_005266289 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>XP_005266288 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L+ +QGS Sbjct: 583 NILKTTQGS 591>XP_006719746 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL+E+S G Sbjct: 305 NLIEISTG 312>XP_005253685 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL+E+S G Sbjct: 305 NLIEISTG 312>XP_005253684 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL+E+S G Sbjct: 317 NLIEISTG 324>XP_006711205 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLLEVSQ 7 NLLEVS+ Sbjct: 346 NLLEVSE 352>NP_001138483 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLEVSQGS 9 LLE SQG+ Sbjct: 107 LLEASQGT 114>NP_003950 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL+E+S G Sbjct: 317 NLIEISTG 324>NP_060791 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 NL+++ QGS Sbjct: 239 NLIKIFQGS 247>NP_001034930 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 202 NLLQTSEG 209>NP_079124 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLEVSQGS 9 ++EV+QGS Sbjct: 224 VMEVAQGS 231>NP_001273409 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 13 NLLQTSEG 20>NP_055598 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 202 NLLQTSEG 209>NP_002635 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LEVSQG 8 LEVSQG Sbjct: 125 LEVSQG 130>NP_619520 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL++V QG Sbjct: 1026 NLIQVRQG 1033>NP_055781 Length = 1155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL++V QG Sbjct: 987 NLIQVRQG 994>NP_055918 Length = 1925 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NLLEVSQGS 9 N+L++ QG+ Sbjct: 263 NILKIKQGA 271>NP_955389 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 202 NLLQTSEG 209>NP_001273408 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 13 NLLQTSEG 20>XP_006725628 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 202 NLLQTSEG 209>XP_006725627 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 202 NLLQTSEG 209>XP_006720851 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 13 NLLQTSEG 20>XP_005254865 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NLL+ S+G Sbjct: 202 NLLQTSEG 209>XP_006713096 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL++V QG Sbjct: 994 NLIQVRQG 1001>XP_006713095 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLLEVSQG 8 NL++V QG Sbjct: 1054 NLIQVRQG 1061>XP_005273220 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LEVSQG 8 LEVSQG Sbjct: 125 LEVSQG 130>XP_005244856 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLEVSQGS 9 ++EV+QGS Sbjct: 224 VMEVAQGS 231>XP_006710969 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLEVSQGS 9 ++EV+QGS Sbjct: 224 VMEVAQGS 231>XP_005244855 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLEVSQGS 9 ++EV+QGS Sbjct: 200 VMEVAQGS 207Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.120 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,978 Number of extensions: 721 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |