Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 299 NP_055756 18 1135 XP_005261449 18 1135 XP_005261448 18 1135 NP_000030 17 2528 NP_569830 17 2528 XP_005271597 17 2528 XP_005271596 17 2528 XP_005253262 17 2528 XP_005253259 17 2528 XP_005253257 17 2528 NP_569831 17 2528 NP_872348 17 3301 NP_006018 17 4312 NP_569082 17 4312 NP_003677 17 4312 XP_005273407 17 4312 XP_006711903 17 4312 NP_001008225 16 5631 NP_060473 16 5631 NP_653267 16 5631 NP_001264262 16 5631 XP_003959998 16 5631 XP_005254586 16 5631 XP_005254585 16 5631 XP_005254584 16 5631 NP_689542 16 5631 NP_005893 16 7355 NP_001003652 16 7355 NP_001138576 16 7355 NP_001129409 16 7355 NP_001138574 16 7355 NP_005892 16 7355 NP_001138575 16 7355 NP_775929 16 7355 NP_001363 16 7355 XP_006722514 16 7355 XP_005258316 16 7355 XP_006721530 16 7355 XP_006721529 16 7355 XP_006721528 16 7355 XP_006720569 16 7355 XP_005265147 16 7355 XP_006713180 16 7355 NP_055916 15 9605 NP_001025055 15 9605 NP_060124 15 9605 NP_001180236 15 9605 XP_006715585 15 9605 XP_005267124 15 9605 XP_005267123 15 9605 XP_006715584 15 9605 XP_005267122 15 9605 XP_006715583 15 9605 XP_005267121 15 9605 XP_005245066 15 9605 XP_005245065 15 9605 NP_061735 15 9605 NP_114382 15 9605>NP_004351 Length = 882 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NLKLMDNQ 8 NLKLMDNQ Sbjct: 666 NLKLMDNQ 673>NP_055756 Length = 970 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 NLKLMDN 7 NLKLMDN Sbjct: 141 NLKLMDN 147>XP_005261449 Length = 1029 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 NLKLMDN 7 NLKLMDN Sbjct: 203 NLKLMDN 209>XP_005261448 Length = 1032 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 NLKLMDN 7 NLKLMDN Sbjct: 203 NLKLMDN 209>NP_000030 Length = 267 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLKLMDN 7 NLKL+DN Sbjct: 67 NLKLLDN 73>NP_569830 Length = 1479 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NLK M NQ+ Sbjct: 1465 NLKFMHNQF 1473>XP_005271597 Length = 267 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLKLMDN 7 NLKL+DN Sbjct: 67 NLKLLDN 73>XP_005271596 Length = 267 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLKLMDN 7 NLKL+DN Sbjct: 67 NLKLLDN 73>XP_005253262 Length = 1479 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NLK M NQ+ Sbjct: 1465 NLKFMHNQF 1473>XP_005253259 Length = 1561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NLK M NQ+ Sbjct: 1547 NLKFMHNQF 1555>XP_005253257 Length = 1580 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NLK M NQ+ Sbjct: 1566 NLKFMHNQF 1574>NP_569831 Length = 1581 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NLK M NQ+ Sbjct: 1567 NLKFMHNQF 1575>NP_872348 Length = 696 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLKLMDNQY 9 ++ LMDN+Y Sbjct: 678 SISLMDNKY 686>NP_006018 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLKLMDNQ 8 N+KL+D+Q Sbjct: 708 NIKLLDSQ 715>NP_569082 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLKLMDNQ 8 N+KL+D+Q Sbjct: 708 NIKLLDSQ 715>NP_003677 Length = 803 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLKLMDNQ 8 N+KL+D+Q Sbjct: 708 NIKLLDSQ 715>XP_005273407 Length = 845 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLKLMDNQ 8 N+KL+D+Q Sbjct: 707 NIKLLDSQ 714>XP_006711903 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLKLMDNQ 8 N+KL+D+Q Sbjct: 708 NIKLLDSQ 715>NP_001008225 Length = 1403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 K+M NQY Sbjct: 840 KMMSNQY 846>NP_060473 Length = 1416 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 K+M NQY Sbjct: 853 KMMSNQY 859>NP_653267 Length = 4753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KLMDNQY 9 K+MD+QY Sbjct: 1289 KVMDDQY 1295>NP_001264262 Length = 917 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLMDNQY 9 LK+M+ QY Sbjct: 509 LKIMEEQY 516>XP_003959998 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLMDNQY 9 LK+M+ QY Sbjct: 231 LKIMEEQY 238>XP_005254586 Length = 1392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 K+M NQY Sbjct: 829 KMMSNQY 835>XP_005254585 Length = 1405 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 K+M NQY Sbjct: 842 KMMSNQY 848>XP_005254584 Length = 1411 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 K+M NQY Sbjct: 848 KMMSNQY 854>NP_689542 Length = 414 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLKL DN+ Sbjct: 253 NLKLDDNE 260>NP_005893 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 339 NLKIFNNQ 346>NP_001003652 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 381 NLKIFNNQ 388>NP_001138576 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 144 NLKIFNNQ 151>NP_001129409 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 351 NLKIFNNQ 358>NP_001138574 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 234 NLKIFNNQ 241>NP_005892 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 381 NLKIFNNQ 388>NP_001138575 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 295 NLKIFNNQ 302>NP_775929 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 N K+MD+Q Sbjct: 202 NTKIMDHQ 209>NP_001363 Length = 4486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NL+LM N Y Sbjct: 738 NLELMANWY 746>XP_006722514 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 381 NLKIFNNQ 388>XP_005258316 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 381 NLKIFNNQ 388>XP_006721530 Length = 2746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NL+LM N Y Sbjct: 738 NLELMANWY 746>XP_006721529 Length = 2817 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NL+LM N Y Sbjct: 738 NLELMANWY 746>XP_006721528 Length = 3869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLKLMDNQY 9 NL+LM N Y Sbjct: 738 NLELMANWY 746>XP_006720569 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 NLK+ +NQ Sbjct: 287 NLKIFNNQ 294>XP_005265147 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 N K+MD+Q Sbjct: 202 NTKIMDHQ 209>XP_006713180 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLKLMDNQ 8 N K+MD+Q Sbjct: 202 NTKIMDHQ 209>NP_055916 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LKLMDN 7 +KLMDN Sbjct: 450 MKLMDN 455>NP_001025055 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 940 MPLMDNPY 947>NP_060124 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NLKLMDNQY 9 N L+DN Y Sbjct: 401 NQDLLDNSY 409>NP_001180236 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NLKLMDNQY 9 N L+DN Y Sbjct: 401 NQDLLDNSY 409>XP_006715585 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 940 MPLMDNPY 947>XP_005267124 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 940 MPLMDNPY 947>XP_005267123 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 940 MPLMDNPY 947>XP_006715584 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 940 MPLMDNPY 947>XP_005267122 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 940 MPLMDNPY 947>XP_006715583 Length = 1431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 986 MPLMDNPY 993>XP_005267121 Length = 1444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LKLMDNQY 9 + LMDN Y Sbjct: 999 MPLMDNPY 1006>XP_005245066 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LKLMDN 7 +KLMDN Sbjct: 330 MKLMDN 335>XP_005245065 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LKLMDN 7 +KLMDN Sbjct: 450 MKLMDN 455>NP_061735 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 KL+DN Y Sbjct: 396 KLVDNYY 402>NP_114382 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDNQY 9 KL+DN Y Sbjct: 396 KLVDNYY 402Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,468 Number of extensions: 1002 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |