Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_006260 17 4312 NP_002653 16 5631 NP_473362 16 5631 NP_000484 16 5631 XP_006715396 16 5631 XP_006715395 16 5631 XP_005247590 16 5631 NP_604391 16 7355 NP_004370 16 7355 NP_001185708 16 7355 NP_003582 16 7355 NP_006381 16 7355 NP_001005739 16 7355 NP_060687 16 7355 NP_057600 16 7355 NP_001185707 16 7355 NP_001185706 16 7355 XP_005257785 16 7355 XP_006712092 16 7355 NP_001138497 16 7355 NP_115510 16 7355 NP_000350 15 9605 NP_001743 15 9605 NP_071328 15 9605 NP_009146 15 9605 NP_003322 15 9605 NP_055798 15 9605 NP_055421 15 9605 NP_115545 15 9605 NP_001258531 15 9605 NP_002504 15 9605 NP_919288 15 9605 NP_065856 15 9605 XP_006722575 15 9605 XP_006721714 15 9605 XP_006714830 15 9605 XP_006714829 15 9605 XP_006714828 15 9605 XP_005263389 15 9605 XP_005263388 15 9605 XP_005263387 15 9605 XP_006714468 15 9605 XP_005263386 15 9605 XP_005263385 15 9605 XP_005263384 15 9605 XP_006712548 15 9605 XP_005246130 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2658 NPIHGIVQS 2666>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2679 NPIHGIVQS 2687>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2689 NPIHGIVQS 2697>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2689 NPIHGIVQS 2697>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2658 NPIHGIVQS 2666>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2668 NPIHGIVQS 2676>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2689 NPIHGIVQS 2697>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2676 NPIHGIVQS 2684>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2679 NPIHGIVQS 2687>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N IHGIVQS Sbjct: 2689 NPIHGIVQS 2697>NP_006260 Length = 2156 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N+IHG +Q Sbjct: 1895 NMIHGTLQ 1902>NP_002653 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NLIHG+ Sbjct: 595 NLIHGL 600>NP_473362 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 +L HGI++S Sbjct: 27 SLAHGIIRS 35>NP_000484 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 14 NLVHGV 19>XP_006715396 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 14 NLVHGV 19>XP_006715395 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 14 NLVHGV 19>XP_005247590 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NLIHG+ Sbjct: 595 NLIHGL 600>NP_604391 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IHGIVQS 9 +HG++Q+ Sbjct: 66 VHGVIQA 72>NP_004370 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IHGIVQS 9 +HG++Q+ Sbjct: 66 VHGVIQA 72>NP_001185708 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIHGIVQS 9 +IHG++ S Sbjct: 193 VIHGVINS 200>NP_003582 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIHGIVQS 9 +IHG++ S Sbjct: 180 VIHGVINS 187>NP_006381 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NLIHGIVQS 9 N++ GI++S Sbjct: 95 NIVEGIIRS 103>NP_001005739 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLIHGIVQS 9 N+IH +V S Sbjct: 458 NIIHSVVLS 466>NP_060687 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 177 NLLHGV 182>NP_057600 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLIHGIVQS 9 N+IH +V S Sbjct: 470 NIIHSVVLS 478>NP_001185707 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIHGIVQS 9 +IHG++ S Sbjct: 199 VIHGVINS 206>NP_001185706 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIHGIVQS 9 +IHG++ S Sbjct: 180 VIHGVINS 187>XP_005257785 Length = 1887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HGIVQS 9 HG+VQS Sbjct: 708 HGLVQS 713>XP_006712092 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLIHGIVQS 9 N+IH +V S Sbjct: 434 NIIHSVVLS 442>NP_001138497 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 140 NLLHGV 145>NP_115510 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HGIVQS 9 HG+VQS Sbjct: 542 HGLVQS 547>NP_000350 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 3 IHGIVQ 8 +HG++Q Sbjct: 778 VHGVIQ 783>NP_001743 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLIHGIVQS 9 N IH VQS Sbjct: 507 NAIHTFVQS 515>NP_071328 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NLIHG 5 NLIHG Sbjct: 431 NLIHG 435>NP_009146 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 NL+HG ++ Sbjct: 184 NLLHGALE 191>NP_003322 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NLIHGIV 7 NL+HG V Sbjct: 729 NLVHGNV 735>NP_055798 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IHGIVQS 9 IH IVQS Sbjct: 1248 IHDIVQS 1254>NP_055421 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>NP_115545 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NLIHG 5 NLIHG Sbjct: 217 NLIHG 221>NP_001258531 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 303 NTINGVVQ 310>NP_002504 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NLIHG 5 NLIHG Sbjct: 132 NLIHG 136>NP_919288 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IHGIVQ 8 +HG+VQ Sbjct: 610 VHGLVQ 615>NP_065856 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 18 NLLHGL 23>XP_006722575 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NLIHGI 6 NL+HG+ Sbjct: 62 NLLHGL 67>XP_006721714 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 NL+HG ++ Sbjct: 184 NLLHGALE 191>XP_006714830 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IHGIVQS 9 IH IVQS Sbjct: 963 IHDIVQS 969>XP_006714829 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IHGIVQS 9 IH IVQS Sbjct: 1049 IHDIVQS 1055>XP_006714828 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IHGIVQS 9 IH IVQS Sbjct: 1082 IHDIVQS 1088>XP_005263389 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>XP_005263388 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>XP_005263387 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>XP_006714468 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 367 NTINGVVQ 374>XP_005263386 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>XP_005263385 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>XP_005263384 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLIHGIVQ 8 N I+G+VQ Sbjct: 421 NTINGVVQ 428>XP_006712548 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IHGIVQ 8 +HG+VQ Sbjct: 242 VHGLVQ 247>XP_005246130 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IHGIVQ 8 +HG+VQ Sbjct: 242 VHGLVQ 247Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.141 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,367 Number of extensions: 736 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |