Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 21 229 NP_861969 21 229 NP_000259 21 229 NP_861968 21 229 NP_861966 21 229 NP_861970 21 229 NP_861546 21 229 NP_861967 21 229 NP_588613 17 2528 NP_001008738 17 2528 NP_001035026 17 3301 NP_036273 17 3301 XP_005266398 17 3301 XP_005266397 17 3301 XP_006717717 17 4312 XP_006717716 17 4312 XP_006717715 17 4312 XP_006717714 17 4312 XP_006717713 17 4312 XP_006717712 17 4312 XP_006717711 17 4312 XP_006717710 17 4312 XP_006717709 17 4312 XP_006717708 17 4312 NP_001185924 16 7355 NP_001269695 16 7355 NP_071935 16 7355 NP_056416 16 7355 NP_001265115 16 7355 NP_001265114 16 7355 XP_006717816 16 7355 XP_006717815 16 7355 XP_006717814 16 7355 XP_005251604 16 7355 NP_071362 16 7355 NP_001005174 16 7355 NP_115859 15 9605 NP_061978 15 9605 NP_000843 15 9605 NP_055519 15 9605 NP_000203 15 9605 NP_115582 15 9605 NP_055421 15 9605 NP_001258531 15 9605 NP_060787 15 9605 NP_060733 15 9605 NP_001136336 15 9605 XP_006721417 15 9605 XP_006721416 15 9605 XP_006721363 15 9605 XP_005256258 15 9605 XP_005256257 15 9605 XP_005256256 15 9605 XP_006721362 15 9605 XP_006721361 15 9605 XP_005256254 15 9605 XP_005256253 15 9605 XP_005256252 15 9605 XP_005256251 15 9605 XP_006721360 15 9605 XP_005256250 15 9605 XP_005263389 15 9605 XP_005263388 15 9605 XP_006714468 15 9605 XP_005263386 15 9605 XP_005263385 15 9605 XP_005263384 15 9605 XP_005248229 15 9605 XP_006714030 15 9605 XP_006712103 15 9605 XP_006712102 15 9605 XP_005244872 15 9605>NP_057502 Length = 590 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 499 NLIGDSLSF 507>NP_861969 Length = 507 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 416 NLIGDSLSF 424>NP_000259 Length = 595 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 499 NLIGDSLSF 507>NP_861968 Length = 507 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 416 NLIGDSLSF 424>NP_861966 Length = 548 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 457 NLIGDSLSF 465>NP_861970 Length = 590 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 499 NLIGDSLSF 507>NP_861546 Length = 590 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 499 NLIGDSLSF 507>NP_861967 Length = 549 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLIGDSMSF 9 NLIGDS+SF Sbjct: 458 NLIGDSLSF 466>NP_588613 Length = 1166 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LIGDSMS 8 LIGDSMS Sbjct: 754 LIGDSMS 760>NP_001008738 Length = 1138 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LIGDSMS 8 LIGDSMS Sbjct: 726 LIGDSMS 732>NP_001035026 Length = 874 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 NLI DSM + Sbjct: 425 NLIADSMEY 433>NP_036273 Length = 887 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 NLI DSM + Sbjct: 438 NLIADSMEY 446>XP_005266398 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 NLI DSM + Sbjct: 6 NLIADSMEY 14>XP_005266397 Length = 709 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 NLI DSM + Sbjct: 260 NLIADSMEY 268>XP_006717717 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717716 Length = 1619 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717715 Length = 1660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717714 Length = 1665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717713 Length = 1666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717712 Length = 1670 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717711 Length = 1677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717710 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717709 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717708 Length = 1717 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMSF Sbjct: 203 GDSMSF 208>NP_001185924 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LIGDSMS 8 LIGD MS Sbjct: 39 LIGDGMS 45>NP_001269695 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NLIGDSM 7 NLI DSM Sbjct: 256 NLISDSM 262>NP_071935 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NLIGDSM 7 NLI DSM Sbjct: 326 NLISDSM 332>NP_056416 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 709 NIVGDAM 715>NP_001265115 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 454 NIVGDAM 460>NP_001265114 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 717 NIVGDAM 723>XP_006717816 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 717 NIVGDAM 723>XP_006717815 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 596 NIVGDAM 602>XP_006717814 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 717 NIVGDAM 723>XP_005251604 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NLIGDSM 7 NLI DSM Sbjct: 388 NLISDSM 394>NP_071362 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 N++GD+M Sbjct: 717 NIVGDAM 723>NP_001005174 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIGDSMSF 9 L+GD +SF Sbjct: 310 LLGDKVSF 317>NP_115859 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMS+ Sbjct: 586 GDSMSY 591>NP_061978 Length = 4242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDSMS+ Sbjct: 4155 GDSMSY 4160>NP_000843 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIGDSMSF 9 ++GD +SF Sbjct: 144 IVGDQISF 151>NP_055519 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NLIGDSMSF 9 N+IGD F Sbjct: 149 NIIGDPADF 157>NP_000203 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGDSMSF 9 IGD++SF Sbjct: 417 IGDTVSF 423>NP_115582 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>NP_055421 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 710 NLVGDAL 716>NP_001258531 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 592 NLVGDAL 598>NP_060787 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDS+SF Sbjct: 173 GDSLSF 178>NP_060733 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGDSMSF 9 +GD MSF Sbjct: 1354 VGDVMSF 1360>NP_001136336 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 N+IG M+F Sbjct: 1005 NVIGQRMNF 1013>XP_006721417 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 N+IG M+F Sbjct: 1005 NVIGQRMNF 1013>XP_006721416 Length = 2504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLIGDSMSF 9 N+IG M+F Sbjct: 988 NVIGQRMNF 996>XP_006721363 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>XP_005256258 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1222 NLLGDS 1227>XP_005256257 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>XP_005256256 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1252 NLLGDS 1257>XP_006721362 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>XP_006721361 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1223 NLLGDS 1228>XP_005256254 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1224 NLLGDS 1229>XP_005256253 Length = 1838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1225 NLLGDS 1230>XP_005256252 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1252 NLLGDS 1257>XP_005256251 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>XP_006721360 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>XP_005256250 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLIGDS 6 NL+GDS Sbjct: 1253 NLLGDS 1258>XP_005263389 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 710 NLVGDAL 716>XP_005263388 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 710 NLVGDAL 716>XP_006714468 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 656 NLVGDAL 662>XP_005263386 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 702 NLVGDAL 708>XP_005263385 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 710 NLVGDAL 716>XP_005263384 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLIGDSM 7 NL+GD++ Sbjct: 710 NLVGDAL 716>XP_005248229 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDS+SF Sbjct: 108 GDSLSF 113>XP_006714030 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDSMSF 9 GDS+SF Sbjct: 142 GDSLSF 147>XP_006712103 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGDSMSF 9 +GD MSF Sbjct: 1094 VGDVMSF 1100>XP_006712102 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGDSMSF 9 +GD MSF Sbjct: 1232 VGDVMSF 1238>XP_005244872 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NLIGDSMSF 9 N+IGD F Sbjct: 185 NIIGDPADF 193Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.138 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,972 Number of extensions: 683 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |