Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 20 509 XP_005273257 20 509 NP_001184113 18 1135 NP_113606 17 4312 NP_060907 17 4312 NP_932095 17 4312 XP_006717237 17 4312 XP_005252143 17 4312 NP_000758 16 5631 NP_056197 16 5631 NP_001106995 16 5631 NP_689828 16 5631 XP_006723247 16 5631 XP_005258908 16 5631 XP_005258907 16 5631 XP_006723246 16 5631 XP_005258906 16 5631 XP_006723114 16 5631 XP_005258626 16 5631 XP_006723113 16 5631 XP_005267560 16 5631 XP_005267559 16 5631 XP_005247217 16 5631 NP_001025168 16 5631 NP_001139137 16 5631 NP_001186948 16 7355 NP_000130 16 7355 NP_001243845 16 7355 NP_001363 16 7355 NP_872588 16 7355 NP_000904 16 7355 XP_006723863 16 7355 XP_005260263 16 7355 XP_006723862 16 7355 XP_006721530 16 7355 XP_006721529 16 7355 XP_006721528 16 7355 XP_005273903 16 7355 NP_115804 15 9605 NP_001096654 15 9605 NP_001264242 15 9605 NP_060823 15 9605 XP_006724772 15 9605 XP_006721636 15 9605 XP_006721635 15 9605 XP_006721634 15 9605 XP_005267890 15 9605 NP_940914 15 9605>NP_064450 Length = 1722 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LFQSTFSE 9 LFQSTFSE Sbjct: 1455 LFQSTFSE 1462>XP_005273257 Length = 1726 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LFQSTFSE 9 LFQSTFSE Sbjct: 1459 LFQSTFSE 1466>NP_001184113 Length = 333 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LFQSTFSE 9 LF+STFSE Sbjct: 317 LFESTFSE 324>NP_113606 Length = 981 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 +LFQST SE Sbjct: 55 SLFQSTESE 63>NP_060907 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLFQSTFSE 9 N++Q FSE Sbjct: 141 NIYQENFSE 149>NP_932095 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLFQSTFSE 9 N++Q FSE Sbjct: 141 NIYQENFSE 149>XP_006717237 Length = 470 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLFQSTFSE 9 N++Q FSE Sbjct: 141 NIYQENFSE 149>XP_005252143 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLFQSTFSE 9 N++Q FSE Sbjct: 141 NIYQENFSE 149>NP_000758 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFQSTFS 8 NLF TFS Sbjct: 200 NLFYQTFS 207>NP_056197 Length = 2610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 N+F++ FSE Sbjct: 944 NVFKTAFSE 952>NP_001106995 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FQSTFS 8 FQSTFS Sbjct: 471 FQSTFS 476>NP_689828 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FQSTFS 8 FQSTFS Sbjct: 237 FQSTFS 242>XP_006723247 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 153 NIFRSTF 159>XP_005258908 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 154 NIFRSTF 160>XP_005258907 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 157 NIFRSTF 163>XP_006723246 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 158 NIFRSTF 164>XP_005258906 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 158 NIFRSTF 164>XP_006723114 Length = 386 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFQSTFS 8 NLF TFS Sbjct: 200 NLFYQTFS 207>XP_005258626 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFQSTFS 8 NLF TFS Sbjct: 200 NLFYQTFS 207>XP_006723113 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFQSTFS 8 NLF TFS Sbjct: 200 NLFYQTFS 207>XP_005267560 Length = 2563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 N+F++ FSE Sbjct: 944 NVFKTAFSE 952>XP_005267559 Length = 2610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 N+F++ FSE Sbjct: 944 NVFKTAFSE 952>XP_005247217 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FQSTFS 8 FQSTFS Sbjct: 395 FQSTFS 400>NP_001025168 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 158 NIFRSTF 164>NP_001139137 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLFQSTF 7 N+F+STF Sbjct: 157 NIFRSTF 163>NP_001186948 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFQSTFS 8 N+F STF+ Sbjct: 133 NMFTSTFT 140>NP_000130 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 N++ +T+SE Sbjct: 223 NIYSATYSE 231>NP_001243845 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 N++ +T+SE Sbjct: 178 NIYSATYSE 186>NP_001363 Length = 4486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FQSTFSE 9 +QSTFS+ Sbjct: 1006 YQSTFSQ 1012>NP_872588 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFQSTFS 8 N+F STF+ Sbjct: 133 NMFTSTFT 140>NP_000904 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFQSTFS 8 N+F STF+ Sbjct: 133 NMFTSTFT 140>XP_006723863 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFQSTFS 8 N+F STF+ Sbjct: 52 NMFTSTFT 59>XP_005260263 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFQSTFS 8 N+F STF+ Sbjct: 128 NMFTSTFT 135>XP_006723862 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFQSTFS 8 N+F STF+ Sbjct: 133 NMFTSTFT 140>XP_006721530 Length = 2746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FQSTFSE 9 +QSTFS+ Sbjct: 1006 YQSTFSQ 1012>XP_006721529 Length = 2817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FQSTFSE 9 +QSTFS+ Sbjct: 1006 YQSTFSQ 1012>XP_006721528 Length = 3869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FQSTFSE 9 +QSTFS+ Sbjct: 1006 YQSTFSQ 1012>XP_005273903 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NLFQSTFSE 9 N++ +T+SE Sbjct: 230 NIYSATYSE 238>NP_115804 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NLFQSTF 7 NLF +TF Sbjct: 1251 NLFSATF 1257>NP_001096654 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFQSTFSE 9 +F+S FSE Sbjct: 922 IFRSVFSE 929>NP_001264242 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFQSTFSE 9 +F+S FSE Sbjct: 1145 IFRSVFSE 1152>NP_060823 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFQST 6 N+FQST Sbjct: 73 NIFQST 78>XP_006724772 Length = 1605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NLFQSTF 7 NLF +TF Sbjct: 1046 NLFSATF 1052>XP_006721636 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFQST 6 N+FQST Sbjct: 309 NIFQST 314>XP_006721635 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFQST 6 N+FQST Sbjct: 332 NIFQST 337>XP_006721634 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFQST 6 N+FQST Sbjct: 333 NIFQST 338>XP_005267890 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFQST 6 N+FQST Sbjct: 73 NIFQST 78>NP_940914 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LFQSTFSE 9 LFQ TF + Sbjct: 244 LFQKTFQD 251Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.124 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,312 Number of extensions: 896 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |