Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_114432 18 1135 NP_055845 17 4312 NP_075463 17 4312 NP_065789 17 4312 XP_006719812 17 4312 XP_005248150 17 4312 XP_005248148 17 4312 XP_005248147 17 4312 XP_005248145 17 4312 XP_005248144 17 4312 XP_005248143 17 4312 XP_005248142 17 4312 XP_005248141 17 4312 XP_005248140 17 4312 XP_005248139 17 4312 NP_065813 16 5631 NP_006382 16 5631 XP_005269099 16 5631 NP_057287 16 7355 NP_055665 16 7355 NP_077747 16 7355 NP_001035723 16 7355 NP_001028289 16 7355 NP_004617 16 7355 NP_932069 16 7355 XP_005274288 16 7355 XP_005250066 16 7355 XP_005250064 16 7355 XP_005250063 16 7355 XP_005250062 16 7355 XP_005250061 16 7355 XP_006716084 16 7355 XP_005250060 16 7355 XP_005250059 16 7355 XP_006713496 16 7355 XP_005265679 16 7355 NP_056141 15 9605 NP_003194 15 9605 NP_001164108 15 9605 NP_001188263 15 9605 NP_596870 15 9605 NP_689716 15 9605 NP_001106271 15 9605 NP_066920 15 9605 NP_066363 15 9605 NP_998797 15 9605 NP_998796 15 9605 XP_006723899 15 9605 XP_005264578 15 9605 XP_005264577 15 9605 XP_006712148 15 9605 XP_006712147 15 9605 XP_006712146 15 9605 XP_006712145 15 9605 XP_006712144 15 9605 XP_006712143 15 9605 XP_005264569 15 9605 XP_005277572 15 9605 XP_005277571 15 9605 XP_006711310 15 9605 XP_005277570 15 9605 XP_005277569 15 9605 XP_006711309 15 9605 XP_005277568 15 9605 XP_005277567 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLEIIKTIV 9 NLEIIKT+V Sbjct: 2234 NLEIIKTLV 2242>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLEIIKTIV 9 NLEIIKT+V Sbjct: 2234 NLEIIKTLV 2242>NP_114432 Length = 1249 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NLEIIKTIV 9 NLE++KT++ Sbjct: 716 NLELVKTVI 724>NP_055845 Length = 3013 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2223 NLEIIKII 2230>NP_075463 Length = 3013 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLEIIKTI 8 N+E++KTI Sbjct: 2264 NVEVLKTI 2271>NP_065789 Length = 1771 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEIIKTIV 9 NLEI+K ++ Sbjct: 50 NLEIVKELI 58>XP_006719812 Length = 3019 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLEIIKTI 8 N+E++KTI Sbjct: 2261 NVEVLKTI 2268>XP_005248150 Length = 2044 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 1254 NLEIIKII 1261>XP_005248148 Length = 3028 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2238 NLEIIKII 2245>XP_005248147 Length = 3028 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2238 NLEIIKII 2245>XP_005248145 Length = 3079 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2289 NLEIIKII 2296>XP_005248144 Length = 3099 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2315 NLEIIKII 2322>XP_005248143 Length = 3105 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2315 NLEIIKII 2322>XP_005248142 Length = 3114 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2330 NLEIIKII 2337>XP_005248141 Length = 3119 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2329 NLEIIKII 2336>XP_005248140 Length = 3119 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2329 NLEIIKII 2336>XP_005248139 Length = 3120 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 NLEIIK I Sbjct: 2330 NLEIIKII 2337>NP_065813 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 EIIKTI+ Sbjct: 681 EIIKTII 687>NP_006382 Length = 1038 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 +EI+KT+V Sbjct: 229 IEILKTVV 236>XP_005269099 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 EIIKTI+ Sbjct: 658 EIIKTII 664>NP_057287 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 514 LEILETIV 521>NP_055665 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 681 EVIKTII 687>NP_077747 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 273 LEILETIV 280>NP_001035723 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 470 LEILETIV 477>NP_001028289 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 657 EVIKTII 663>NP_004617 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEIIKTIV 9 NLE++ T+V Sbjct: 62 NLELMHTVV 70>NP_932069 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEIIKTIV 9 NLE++ T+V Sbjct: 29 NLELVFTVV 37>XP_005274288 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEIIKTIV 9 NLE++ T+V Sbjct: 62 NLELMHTVV 70>XP_005250066 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 253 LEILETIV 260>XP_005250064 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 389 LEILETIV 396>XP_005250063 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 390 LEILETIV 397>XP_005250062 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 513 LEILETIV 520>XP_005250061 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 470 LEILETIV 477>XP_006716084 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 510 LEILETIV 517>XP_005250060 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 513 LEILETIV 520>XP_005250059 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEIIKTIV 9 LEI++TIV Sbjct: 514 LEILETIV 521>XP_006713496 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 173 EVIKTII 179>XP_005265679 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 681 EVIKTII 687>NP_056141 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 666 ELIKTII 672>NP_003194 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 267 NLEIIK 272>NP_001164108 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 665 ELIKTII 671>NP_001188263 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 98 NLEIIK 103>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLEIIKT 7 NL+I+KT Sbjct: 4711 NLDILKT 4717>NP_689716 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 122 NLEIIK 127>NP_001106271 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>NP_066920 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>NP_066363 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEIIKTIV 9 NLE ++TI+ Sbjct: 294 NLEKVQTII 302>NP_998797 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 122 NLEIIK 127>NP_998796 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 122 NLEIIK 127>XP_006723899 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEIIKTIV 9 NLE ++TI+ Sbjct: 294 NLEKVQTII 302>XP_005264578 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 275 NLEIIK 280>XP_005264577 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NLEIIK 6 NLEIIK Sbjct: 275 NLEIIK 280>XP_006712148 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>XP_006712147 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>XP_006712146 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>XP_006712145 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>XP_006712144 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 599 NDEIVKTI 606>XP_006712143 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 622 NDEIVKTI 629>XP_005264569 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLEIIKTI 8 N EI+KTI Sbjct: 629 NDEIVKTI 636>XP_005277572 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 665 ELIKTII 671>XP_005277571 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 666 ELIKTII 672>XP_006711310 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 666 ELIKTII 672>XP_005277570 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 513 ELIKTII 519>XP_005277569 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 513 ELIKTII 519>XP_006711309 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 666 ELIKTII 672>XP_005277568 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 665 ELIKTII 671>XP_005277567 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIIKTIV 9 E+IKTI+ Sbjct: 666 ELIKTII 672Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.146 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,176 Number of extensions: 589 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |