Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000912 17 4312 XP_006719149 17 4312 NP_001020949 16 5631 NP_057524 16 5631 NP_001075019 16 5631 NP_003557 16 5631 XP_006724836 16 5631 XP_005262507 16 5631 XP_006724835 16 5631 XP_006724834 16 5631 XP_006724833 16 5631 XP_006724832 16 5631 XP_006724831 16 5631 XP_006724830 16 5631 XP_005262504 16 5631 XP_006723301 16 5631 XP_005259029 16 5631 XP_006723300 16 5631 XP_005259028 16 5631 XP_006719694 16 5631 XP_006713481 16 5631 XP_005265642 16 5631 XP_005265641 16 5631 XP_006713480 16 5631 XP_006713479 16 5631 NP_004794 16 5631 NP_065873 16 7355 NP_002273 16 7355 NP_002272 16 7355 NP_056132 16 7355 NP_061874 16 7355 NP_001269720 16 7355 NP_001269786 16 7355 NP_001269681 16 7355 NP_001269719 16 7355 NP_997294 16 7355 NP_002275 16 7355 NP_001258932 16 7355 XP_005268923 16 7355 XP_005268921 16 7355 XP_006717257 16 7355 XP_006717256 16 7355 XP_006713736 16 7355 XP_005247601 16 7355 XP_006713735 16 7355 XP_006713734 16 7355 XP_005262667 16 7355 XP_005262666 16 7355 XP_006712038 16 7355 XP_006712037 16 7355 XP_006712036 16 7355 XP_006712035 16 7355 XP_005262664 16 7355 XP_005275778 16 7355 NP_001135780 16 7355 NP_038466 15 9605 NP_444295 15 9605 NP_064516 15 9605 NP_038472 15 9605 NP_068798 15 9605 NP_596870 15 9605 NP_065928 15 9605 NP_059509 15 9605 NP_006505 15 9605 XP_005256527 15 9605 XP_005265428 15 9605>NP_000912 Length = 1141 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EALIQIG 9 EAL+QIG Sbjct: 171 EALVQIG 177>XP_006719149 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EALIQIG 9 EAL+QIG Sbjct: 171 EALVQIG 177>NP_001020949 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 402 NLEALLQ 408>NP_057524 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 452 NLEALLQ 458>NP_001075019 Length = 1593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>NP_003557 Length = 1411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 527 NLEALLQ 533>XP_006724836 Length = 1582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_005262507 Length = 1594 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006724835 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006724834 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006724833 Length = 1620 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006724832 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006724831 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006724830 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_005262504 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEALIQIG 9 LEAL++IG Sbjct: 349 LEALLKIG 356>XP_006723301 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 402 NLEALLQ 408>XP_005259029 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 402 NLEALLQ 408>XP_006723300 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 452 NLEALLQ 458>XP_005259028 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 452 NLEALLQ 458>XP_006719694 Length = 1465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL+Q Sbjct: 581 NLEALLQ 587>XP_006713481 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+++IQ G Sbjct: 154 NLDSIIQFG 162>XP_005265642 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+++IQ G Sbjct: 140 NLDSIIQFG 148>XP_005265641 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+++IQ G Sbjct: 140 NLDSIIQFG 148>XP_006713480 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+++IQ G Sbjct: 154 NLDSIIQFG 162>XP_006713479 Length = 608 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+++IQ G Sbjct: 154 NLDSIIQFG 162>NP_004794 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+++IQ G Sbjct: 140 NLDSIIQFG 148>NP_065873 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL++L+Q G Sbjct: 865 NLDSLLQCG 873>NP_002273 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 N+EALIQ Sbjct: 233 NVEALIQ 239>NP_002272 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 N+EALIQ Sbjct: 228 NVEALIQ 234>NP_056132 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>NP_061874 Length = 1706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NL+ALIQ Sbjct: 896 NLDALIQ 902>NP_001269720 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 167 NLDAMEQVG 175>NP_001269786 Length = 1694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NL+ALIQ Sbjct: 896 NLDALIQ 902>NP_001269681 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 167 NLDAMEQVG 175>NP_001269719 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>NP_997294 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEALIQIG 9 LEAL+Q G Sbjct: 115 LEALLQTG 122>NP_002275 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 N+EALIQ Sbjct: 228 NVEALIQ 234>NP_001258932 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL++L+Q G Sbjct: 820 NLDSLLQCG 828>XP_005268923 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 N+EALIQ Sbjct: 305 NVEALIQ 311>XP_005268921 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 N+EALIQ Sbjct: 233 NVEALIQ 239>XP_006717257 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL++L+Q G Sbjct: 692 NLDSLLQCG 700>XP_006717256 Length = 1172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL++L+Q G Sbjct: 781 NLDSLLQCG 789>XP_006713736 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NL+ALIQ Sbjct: 896 NLDALIQ 902>XP_005247601 Length = 1484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NL+ALIQ Sbjct: 686 NLDALIQ 692>XP_006713735 Length = 1656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NL+ALIQ Sbjct: 896 NLDALIQ 902>XP_006713734 Length = 1693 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NL+ALIQ Sbjct: 896 NLDALIQ 902>XP_005262667 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>XP_005262666 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>XP_006712038 Length = 1010 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 167 NLDAMEQVG 175>XP_006712037 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>XP_006712036 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>XP_006712035 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>XP_005262664 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 NL+A+ Q+G Sbjct: 223 NLDAMEQVG 231>XP_005275778 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 N+EALIQ Sbjct: 233 NVEALIQ 239>NP_001135780 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEALIQIG 9 LEA IQ+G Sbjct: 775 LEATIQLG 782>NP_038466 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLEALIQIG 9 NL+ALI G Sbjct: 565 NLQALIATG 573>NP_444295 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLEALIQIG 9 NL+ALI G Sbjct: 537 NLQALIATG 545>NP_064516 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLEALIQIG 9 NL+ALI G Sbjct: 577 NLQALIATG 585>NP_038472 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLEALIQIG 9 NL+ALI G Sbjct: 600 NLQALIATG 608>NP_068798 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NLEALIQ 7 NLEAL++ Sbjct: 450 NLEALVE 456>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLEALIQIG 9 N+EAL++ G Sbjct: 3619 NVEALVERG 3627>NP_065928 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NLEALIQIG 9 N EA +Q G Sbjct: 153 NFEATVQFG 161>NP_059509 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLEALIQIG 9 NL+ALI G Sbjct: 634 NLQALIATG 642>NP_006505 Length = 1956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EALIQIG 9 EA++QIG Sbjct: 694 EAMLQIG 700>XP_005256527 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NLEALIQIG 9 N EA +Q G Sbjct: 153 NFEATVQFG 161>XP_005265428 Length = 1959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EALIQIG 9 EA++QIG Sbjct: 697 EAMLQIG 703Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.145 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 321,819 Number of extensions: 679 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |