Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_004817 17 3301 NP_001277716 17 3301 NP_001269891 17 4312 NP_060880 17 4312 NP_001269892 17 4312 NP_003766 17 4312 NP_002151 16 5631 NP_079350 16 5631 NP_055785 16 5631 NP_001191443 16 5631 NP_001191446 16 5631 NP_001191445 16 5631 XP_003960172 16 5631 XP_006717160 16 5631 XP_006717159 16 5631 XP_006714380 16 5631 XP_006714379 16 5631 XP_006714378 16 5631 XP_006714377 16 5631 XP_005245027 16 5631 XP_003119008 16 5631 XP_003119853 16 5631 NP_004381 16 7355 NP_060362 16 7355 XP_003960128 16 7355 XP_006720541 16 7355 XP_005254378 16 7355 XP_005254377 16 7355 XP_005254238 16 7355 XP_005246736 16 7355 XP_005246735 16 7355 XP_005246734 16 7355 XP_005246733 16 7355 NP_954980 16 7355 NP_658986 15 9605 NP_078858 15 9605 NP_001278232 15 9605 NP_001278214 15 9605 NP_001155056 15 9605 NP_060216 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_003746 15 9605 NP_620414 15 9605 XP_005260720 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLANITISD 9 +LANITISD Sbjct: 2457 DLANITISD 2465>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLANITISD 9 +LANITISD Sbjct: 2252 DLANITISD 2260>NP_004817 Length = 775 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LANITISD 9 LANIT+S+ Sbjct: 320 LANITVSE 327>NP_001277716 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LANITISD 9 LANIT+S+ Sbjct: 320 LANITVSE 327>NP_001269891 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 ++ N+TISD Sbjct: 200 DICNVTISD 208>NP_060880 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 ++ N+TISD Sbjct: 254 DICNVTISD 262>NP_001269892 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 ++ N+TISD Sbjct: 169 DICNVTISD 177>NP_003766 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L NIT+SD Sbjct: 85 LVNITLSD 92>NP_002151 Length = 2201 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L N+TISD Sbjct: 1532 LENLTISD 1539>NP_079350 Length = 4012 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 N+A ITIS+ Sbjct: 3027 NMATITISN 3035>NP_055785 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 LAN+TI D Sbjct: 528 LANLTIPD 535>NP_001191443 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 LAN+TI D Sbjct: 450 LANLTIPD 457>NP_001191446 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 LAN+TI D Sbjct: 488 LANLTIPD 495>NP_001191445 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 LAN+TI D Sbjct: 484 LANLTIPD 491>XP_003960172 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 NLANIT S Sbjct: 389 NLANITDS 396>XP_006717160 Length = 2110 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L N+TISD Sbjct: 1441 LENLTISD 1448>XP_006717159 Length = 2293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L N+TISD Sbjct: 1624 LENLTISD 1631>XP_006714380 Length = 3897 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 N+A ITIS+ Sbjct: 2912 NMATITISN 2920>XP_006714379 Length = 3936 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 N+A ITIS+ Sbjct: 2951 NMATITISN 2959>XP_006714378 Length = 3965 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 N+A ITIS+ Sbjct: 2980 NMATITISN 2988>XP_006714377 Length = 4010 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 N+A ITIS+ Sbjct: 3025 NMATITISN 3033>XP_005245027 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LANITISD 9 LAN+TI D Sbjct: 528 LANLTIPD 535>XP_003119008 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 NLANIT S Sbjct: 389 NLANITDS 396>XP_003119853 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 NLANIT S Sbjct: 389 NLANITDS 396>NP_004381 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 ++ANITI D Sbjct: 227 DVANITIYD 235>NP_060362 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 N+AN+T S Sbjct: 513 NMANVTYS 520>XP_003960128 Length = 160 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLANITIS 8 NL+N+TI+ Sbjct: 41 NLSNLTIN 48>XP_006720541 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLANITIS 8 NLA++T+S Sbjct: 13 NLASVTLS 20>XP_005254378 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLANITIS 8 NLA++T+S Sbjct: 30 NLASVTLS 37>XP_005254377 Length = 231 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLANITIS 8 NLA++T+S Sbjct: 121 NLASVTLS 128>XP_005254238 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLANITISD 9 ++ANITI D Sbjct: 189 DVANITIYD 197>XP_005246736 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 N+AN+T S Sbjct: 555 NMANVTYS 562>XP_005246735 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 N+AN+T S Sbjct: 555 NMANVTYS 562>XP_005246734 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 N+AN+T S Sbjct: 513 NMANVTYS 520>XP_005246733 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLANITIS 8 N+AN+T S Sbjct: 555 NMANVTYS 562>NP_954980 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLANITIS 8 NL+N+TI+ Sbjct: 40 NLSNLTIN 47>NP_658986 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 +AN+ ISD Sbjct: 92 IANLAISD 99>NP_078858 Length = 4981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NITISD 9 NIT+SD Sbjct: 1828 NITVSD 1833>NP_001278232 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NITISD 9 NIT+SD Sbjct: 1828 NITVSD 1833>NP_001278214 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NITISD 9 NIT+SD Sbjct: 1828 NITVSD 1833>NP_001155056 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L N+T+SD Sbjct: 435 LLNLTLSD 442>NP_060216 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L N+T+SD Sbjct: 432 LLNLTLSD 439>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L+N+TI D Sbjct: 4537 LSNLTIQD 4544>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L+N+TI D Sbjct: 3610 LSNLTIQD 3617>NP_003746 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NLANITISD 9 N+A T+SD Sbjct: 116 NVATTTVSD 124>NP_620414 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 +AN+ ISD Sbjct: 101 IANLAISD 108>XP_005260720 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 +AN+ ISD Sbjct: 92 IANLAISD 99>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L+N+TI D Sbjct: 4538 LSNLTIQD 4545>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L+N+TI D Sbjct: 4538 LSNLTIQD 4545>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LANITISD 9 L+N+TI D Sbjct: 4854 LSNLTIQD 4861Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.126 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 302,357 Number of extensions: 344 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |