Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 665 XP_006718908 19 665 XP_005271621 19 665 XP_006718907 19 665 XP_006718906 19 665 XP_005271619 19 665 XP_005271618 19 665 NP_942133 18 1935 NP_942131 18 1935 NP_942134 18 1935 NP_942135 18 1935 NP_942136 18 1935 XP_006725384 18 1935 XP_006725383 18 1935 XP_005257324 18 1935 XP_005257323 18 1935 XP_006721916 18 1935 NP_037393 15 9605 NP_055873 15 9605 NP_001009814 15 9605 NP_001119576 15 9605 NP_037409 15 9605 NP_001119575 15 9605 NP_006150 15 9605 NP_001138582 15 9605 NP_001138581 15 9605 NP_001138580 15 9605 NP_001138579 15 9605 NP_055646 15 9605 XP_006719855 15 9605 XP_006719854 15 9605 XP_006719853 15 9605 XP_005268962 15 9605 XP_006719423 15 9605 XP_006719422 15 9605 XP_005268873 15 9605 XP_005268872 15 9605 XP_005268870 15 9605 XP_005268871 15 9605 XP_005268869 15 9605 XP_005268868 15 9605 XP_005248191 15 9605 XP_005248189 15 9605 XP_005248188 15 9605 XP_005248187 15 9605 XP_006713495 15 9605>NP_000042 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 3003 NKVAERVLM 3011>XP_006718908 Length = 1708 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 1655 NKVAERVLM 1663>XP_005271621 Length = 2708 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 2655 NKVAERVLM 2663>XP_006718907 Length = 3050 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 2997 NKVAERVLM 3005>XP_006718906 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 3003 NKVAERVLM 3011>XP_005271619 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 3003 NKVAERVLM 3011>XP_005271618 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKVVERVLM 9 NKV ERVLM Sbjct: 3003 NKVAERVLM 3011>NP_942133 Length = 2346 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 115 NKVIEKVLI 123>NP_942131 Length = 2383 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 152 NKVIEKVLI 160>NP_942134 Length = 2288 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 57 NKVIEKVLI 65>NP_942135 Length = 2268 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 37 NKVIEKVLI 45>NP_942136 Length = 2346 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 115 NKVIEKVLI 123>XP_006725384 Length = 2268 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 37 NKVIEKVLI 45>XP_006725383 Length = 2338 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 115 NKVIEKVLI 123>XP_005257324 Length = 2268 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 37 NKVIEKVLI 45>XP_005257323 Length = 2268 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 37 NKVIEKVLI 45>XP_006721916 Length = 2375 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKVVERVLM 9 NKV+E+VL+ Sbjct: 152 NKVIEKVLI 160>NP_037393 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKVVERVL 8 NK +ER L Sbjct: 277 NKTIERTL 284>NP_055873 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+V+R L Sbjct: 788 NKIVDRFL 795>NP_001009814 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+V+R L Sbjct: 788 NKIVDRFL 795>NP_001119576 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>NP_037409 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>NP_001119575 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>NP_006150 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+ ERV+ Sbjct: 169 NKIYERVV 176>NP_001138582 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+ ERV+ Sbjct: 192 NKIYERVV 199>NP_001138581 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+ ERV+ Sbjct: 168 NKIYERVV 175>NP_001138580 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+ ERV+ Sbjct: 169 NKIYERVV 176>NP_001138579 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+ ERV+ Sbjct: 219 NKIYERVV 226>NP_055646 Length = 2925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KVVERVLM 9 KVV+RVL+ Sbjct: 2569 KVVKRVLV 2576>XP_006719855 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+V+R L Sbjct: 788 NKIVDRFL 795>XP_006719854 Length = 1550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+V+R L Sbjct: 433 NKIVDRFL 440>XP_006719853 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+V+R L Sbjct: 692 NKIVDRFL 699>XP_005268962 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NKVVERVL 8 NK+ ERV+ Sbjct: 169 NKIYERVV 176>XP_006719423 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_006719422 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268873 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268872 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268870 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268871 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268869 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268868 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVVERVL 8 KVVER+L Sbjct: 545 KVVERLL 551>XP_005248191 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKVVERVL 8 NK +ER L Sbjct: 282 NKTIERTL 289>XP_005248189 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKVVERVL 8 NK +ER L Sbjct: 274 NKTIERTL 281>XP_005248188 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKVVERVL 8 NK +ER L Sbjct: 281 NKTIERTL 288>XP_005248187 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKVVERVL 8 NK +ER L Sbjct: 282 NKTIERTL 289>XP_006713495 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KVVERVLM 9 KVV+RVL+ Sbjct: 2613 KVVKRVLV 2620Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.137 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 320,714 Number of extensions: 405 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |